Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DMBP28068 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DMBP28068 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DMBP28068 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DMBP28068 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DMBP28068 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DMBP28068 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DMBP28068 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 AF201337.1-201ENST00000520239 748 ntBASIC14.93□□□□□ -0.02
HLA-DMBP28068 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 AC004408.2-201ENST00000623613 2777 ntBASIC14.93□□□□□ -0.02
HLA-DMBP28068 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DMBP28068 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DMBP28068 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 HLA-G-202ENST00000376815 851 ntBASIC14.92□□□□□ -0.02
HLA-DMBP28068 HLA-G-203ENST00000376818 1127 ntBASIC14.92□□□□□ -0.02
HLA-DMBP28068 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 C2orf69P4-201ENST00000565394 541 ntBASIC14.92□□□□□ -0.02
HLA-DMBP28068 AC105036.2-201ENST00000569468 176 ntBASIC14.92□□□□□ -0.02
HLA-DMBP28068 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.92□□□□□ -0.02
HLA-DMBP28068 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.92□□□□□ -0.02
HLA-DMBP28068 AL589743.5-201ENST00000616611 1050 ntBASIC14.92□□□□□ -0.02
HLA-DMBP28068 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DMBP28068 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 BX323043.1-201ENST00000641006 1765 ntBASIC14.91□□□□□ -0.02
HLA-DMBP28068 AP001271.2-201ENST00000624018 1556 ntBASIC14.91□□□□□ -0.02
HLA-DMBP28068 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 TSPY6P-201ENST00000448518 926 ntBASIC14.91□□□□□ -0.02
HLA-DMBP28068 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 OR10C1-204ENST00000622521 1039 ntBASIC14.91□□□□□ -0.02
HLA-DMBP28068 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DMBP28068 PHGDH-210ENST00000641115 1638 ntBASIC14.91□□□□□ -0.02
HLA-DMBP28068 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DMBP28068 Z82202.1-201ENST00000623446 1880 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms