Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN3P26045 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PTPN3P26045 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN3P26045 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PTPN3P26045 AL121906.2-201ENST00000621597 723 ntBASIC20.03■□□□□ 0.8
PTPN3P26045 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN3P26045 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN3P26045 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN3P26045 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN3P26045 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN3P26045 AC007952.6-201ENST00000573168 2673 ntBASIC20.02■□□□□ 0.8
PTPN3P26045 AC003957.1-201ENST00000625108 2673 ntBASIC20.02■□□□□ 0.8
PTPN3P26045 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN3P26045 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN3P26045 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PTPN3P26045 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN3P26045 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN3P26045 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN3P26045 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PTPN3P26045 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN3P26045 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN3P26045 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN3P26045 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN3P26045 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN3P26045 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
PTPN3P26045 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.02■□□□□ 0.79
PTPN3P26045 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN3P26045 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN3P26045 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN3P26045 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.02■□□□□ 0.79
PTPN3P26045 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN3P26045 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PTPN3P26045 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.01■□□□□ 0.79
PTPN3P26045 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN3P26045 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN3P26045 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN3P26045 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN3P26045 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.01■□□□□ 0.79
PTPN3P26045 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN3P26045 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN3P26045 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN3P26045 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN3P26045 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN3P26045 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PTPN3P26045 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN3P26045 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN3P26045 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20■□□□□ 0.79
PTPN3P26045 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN3P26045 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
PTPN3P26045 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN3P26045 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20■□□□□ 0.79
PTPN3P26045 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN3P26045 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PTPN3P26045 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20■□□□□ 0.79
PTPN3P26045 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20■□□□□ 0.79
PTPN3P26045 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PTPN3P26045 RNA5SP413-201ENST00000516373 109 ntBASIC20■□□□□ 0.79
PTPN3P26045 PNN-205ENST00000556530 601 ntTSL 2 BASIC20■□□□□ 0.79
PTPN3P26045 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20■□□□□ 0.79
PTPN3P26045 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN3P26045 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN3P26045 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN3P26045 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PTPN3P26045 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN3P26045 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PTPN3P26045 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN3P26045 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20■□□□□ 0.79
PTPN3P26045 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20■□□□□ 0.79
PTPN3P26045 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PTPN3P26045 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
PTPN3P26045 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN3P26045 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20■□□□□ 0.79
PTPN3P26045 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20■□□□□ 0.79
PTPN3P26045 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20■□□□□ 0.79
PTPN3P26045 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.99■□□□□ 0.79
PTPN3P26045 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN3P26045 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
PTPN3P26045 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPN3P26045 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.99■□□□□ 0.79
PTPN3P26045 AC008403.3-201ENST00000598924 454 ntBASIC19.99■□□□□ 0.79
PTPN3P26045 AL121829.2-201ENST00000620908 328 ntBASIC19.99■□□□□ 0.79
PTPN3P26045 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PTPN3P26045 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.99■□□□□ 0.79
PTPN3P26045 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN3P26045 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN3P26045 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN3P26045 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPN3P26045 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms