Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.47■□□□□ 0.71
BCKDHBP21953 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BCKDHBP21953 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BCKDHBP21953 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
BCKDHBP21953 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BCKDHBP21953 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BCKDHBP21953 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BCKDHBP21953 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.46■□□□□ 0.71
BCKDHBP21953 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
BCKDHBP21953 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.46■□□□□ 0.71
BCKDHBP21953 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
BCKDHBP21953 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BCKDHBP21953 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BCKDHBP21953 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BCKDHBP21953 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BCKDHBP21953 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.46■□□□□ 0.71
BCKDHBP21953 SLC25A1P2-201ENST00000430693 912 ntBASIC19.46■□□□□ 0.71
BCKDHBP21953 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
BCKDHBP21953 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.46■□□□□ 0.71
BCKDHBP21953 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.46■□□□□ 0.71
BCKDHBP21953 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.46■□□□□ 0.71
BCKDHBP21953 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
BCKDHBP21953 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.46■□□□□ 0.71
BCKDHBP21953 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.46■□□□□ 0.71
BCKDHBP21953 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BCKDHBP21953 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.46■□□□□ 0.71
BCKDHBP21953 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.46■□□□□ 0.71
BCKDHBP21953 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BCKDHBP21953 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
BCKDHBP21953 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
BCKDHBP21953 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BCKDHBP21953 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.45■□□□□ 0.7
BCKDHBP21953 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BCKDHBP21953 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.45■□□□□ 0.7
BCKDHBP21953 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
BCKDHBP21953 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.45■□□□□ 0.7
BCKDHBP21953 AC092338.2-201ENST00000568827 1415 ntBASIC19.45■□□□□ 0.7
BCKDHBP21953 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.45■□□□□ 0.7
BCKDHBP21953 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BCKDHBP21953 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BCKDHBP21953 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.45■□□□□ 0.7
BCKDHBP21953 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.45■□□□□ 0.7
BCKDHBP21953 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BCKDHBP21953 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
BCKDHBP21953 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.45■□□□□ 0.7
BCKDHBP21953 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.45■□□□□ 0.7
BCKDHBP21953 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.45■□□□□ 0.7
BCKDHBP21953 AC011558.1-201ENST00000623459 338 ntBASIC19.45■□□□□ 0.7
BCKDHBP21953 AC141257.4-201ENST00000634557 245 ntBASIC19.45■□□□□ 0.7
BCKDHBP21953 AC136944.6-201ENST00000634818 245 ntBASIC19.45■□□□□ 0.7
BCKDHBP21953 AP000550.4-202ENST00000639755 178 ntBASIC19.45■□□□□ 0.7
BCKDHBP21953 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
BCKDHBP21953 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BCKDHBP21953 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BCKDHBP21953 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BCKDHBP21953 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BCKDHBP21953 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCKDHBP21953 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCKDHBP21953 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BCKDHBP21953 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCKDHBP21953 AC006128.1-201ENST00000624704 1661 ntBASIC19.44■□□□□ 0.7
BCKDHBP21953 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCKDHBP21953 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.44■□□□□ 0.7
BCKDHBP21953 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.44■□□□□ 0.7
BCKDHBP21953 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.44■□□□□ 0.7
BCKDHBP21953 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BCKDHBP21953 Z85996.1-201ENST00000494644 937 ntBASIC19.44■□□□□ 0.7
BCKDHBP21953 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCKDHBP21953 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.44■□□□□ 0.7
BCKDHBP21953 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.44■□□□□ 0.7
BCKDHBP21953 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCKDHBP21953 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.44■□□□□ 0.7
BCKDHBP21953 AC010653.2-201ENST00000623505 997 ntBASIC19.44■□□□□ 0.7
BCKDHBP21953 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
BCKDHBP21953 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCKDHBP21953 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.44■□□□□ 0.7
BCKDHBP21953 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
BCKDHBP21953 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCKDHBP21953 AC007225.1-201ENST00000566331 1836 ntBASIC19.44■□□□□ 0.7
BCKDHBP21953 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCKDHBP21953 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCKDHBP21953 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BCKDHBP21953 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BCKDHBP21953 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
BCKDHBP21953 AC009947.2-201ENST00000444014 672 ntBASIC19.43■□□□□ 0.7
BCKDHBP21953 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.43■□□□□ 0.7
BCKDHBP21953 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BCKDHBP21953 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.43■□□□□ 0.7
BCKDHBP21953 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.43■□□□□ 0.7
BCKDHBP21953 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.43■□□□□ 0.7
BCKDHBP21953 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCKDHBP21953 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCKDHBP21953 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.43■□□□□ 0.7
BCKDHBP21953 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCKDHBP21953 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.43■□□□□ 0.7
BCKDHBP21953 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.43■□□□□ 0.7
BCKDHBP21953 AC092720.2-201ENST00000602388 1665 ntBASIC19.43■□□□□ 0.7
BCKDHBP21953 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCKDHBP21953 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.42■□□□□ 0.7
BCKDHBP21953 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms