Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYN1P17600 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SYN1P17600 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.47■■□□□ 1.03
SYN1P17600 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYN1P17600 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SYN1P17600 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.47■■□□□ 1.03
SYN1P17600 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.46■■□□□ 1.03
SYN1P17600 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.46■■□□□ 1.03
SYN1P17600 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYN1P17600 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SYN1P17600 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYN1P17600 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SYN1P17600 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.46■■□□□ 1.03
SYN1P17600 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.46■■□□□ 1.03
SYN1P17600 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYN1P17600 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.46■■□□□ 1.03
SYN1P17600 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.46■■□□□ 1.03
SYN1P17600 AP003041.3-201ENST00000527151 707 ntBASIC21.46■■□□□ 1.03
SYN1P17600 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.46■■□□□ 1.03
SYN1P17600 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.46■■□□□ 1.03
SYN1P17600 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.46■■□□□ 1.03
SYN1P17600 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SYN1P17600 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SYN1P17600 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.45■■□□□ 1.02
SYN1P17600 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYN1P17600 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SYN1P17600 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SYN1P17600 FAAHP1-202ENST00000446499 1238 ntBASIC21.45■■□□□ 1.02
SYN1P17600 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.45■■□□□ 1.02
SYN1P17600 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.45■■□□□ 1.02
SYN1P17600 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYN1P17600 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYN1P17600 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYN1P17600 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SYN1P17600 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.45■■□□□ 1.02
SYN1P17600 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYN1P17600 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SYN1P17600 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.45■■□□□ 1.02
SYN1P17600 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.44■■□□□ 1.02
SYN1P17600 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYN1P17600 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYN1P17600 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.44■■□□□ 1.02
SYN1P17600 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.44■■□□□ 1.02
SYN1P17600 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.44■■□□□ 1.02
SYN1P17600 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.44■■□□□ 1.02
SYN1P17600 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SYN1P17600 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.44■■□□□ 1.02
SYN1P17600 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYN1P17600 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
SYN1P17600 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.44■■□□□ 1.02
SYN1P17600 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYN1P17600 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.44■■□□□ 1.02
SYN1P17600 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.44■■□□□ 1.02
SYN1P17600 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.44■■□□□ 1.02
SYN1P17600 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYN1P17600 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SYN1P17600 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SYN1P17600 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.43■■□□□ 1.02
SYN1P17600 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SYN1P17600 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SYN1P17600 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.43■■□□□ 1.02
SYN1P17600 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.43■■□□□ 1.02
SYN1P17600 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.43■■□□□ 1.02
SYN1P17600 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SYN1P17600 AC018553.1-201ENST00000616682 1458 ntBASIC21.43■■□□□ 1.02
SYN1P17600 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SYN1P17600 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.43■■□□□ 1.02
SYN1P17600 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SYN1P17600 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SYN1P17600 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SYN1P17600 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SYN1P17600 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SYN1P17600 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SYN1P17600 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.42■■□□□ 1.02
SYN1P17600 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.42■■□□□ 1.02
SYN1P17600 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.42■■□□□ 1.02
SYN1P17600 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.42■■□□□ 1.02
SYN1P17600 GCSHP2-201ENST00000560971 527 ntBASIC21.42■■□□□ 1.02
SYN1P17600 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.42■■□□□ 1.02
SYN1P17600 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SYN1P17600 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SYN1P17600 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SYN1P17600 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SYN1P17600 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SYN1P17600 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SYN1P17600 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.41■■□□□ 1.02
SYN1P17600 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.41■■□□□ 1.02
SYN1P17600 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.41■■□□□ 1.02
SYN1P17600 SPDYE13P-201ENST00000445314 798 ntBASIC21.41■■□□□ 1.02
SYN1P17600 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SYN1P17600 Z85996.1-201ENST00000494644 937 ntBASIC21.41■■□□□ 1.02
SYN1P17600 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SYN1P17600 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SYN1P17600 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.41■■□□□ 1.02
SYN1P17600 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SYN1P17600 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.4■■□□□ 1.02
SYN1P17600 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SYN1P17600 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SYN1P17600 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SYN1P17600 STARP1-201ENST00000397973 869 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms