Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.42■□□□□ 0.38
CTLA4P16410 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CTLA4P16410 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.42■□□□□ 0.38
CTLA4P16410 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTLA4P16410 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTLA4P16410 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTLA4P16410 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTLA4P16410 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTLA4P16410 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.41■□□□□ 0.38
CTLA4P16410 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.41■□□□□ 0.38
CTLA4P16410 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTLA4P16410 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.41■□□□□ 0.38
CTLA4P16410 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.41■□□□□ 0.38
CTLA4P16410 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.41■□□□□ 0.38
CTLA4P16410 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.41■□□□□ 0.38
CTLA4P16410 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CTLA4P16410 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTLA4P16410 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTLA4P16410 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.41■□□□□ 0.38
CTLA4P16410 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTLA4P16410 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTLA4P16410 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.41■□□□□ 0.38
CTLA4P16410 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTLA4P16410 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CTLA4P16410 AC092368.3-202ENST00000574180 1591 ntBASIC17.4■□□□□ 0.38
CTLA4P16410 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTLA4P16410 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.4■□□□□ 0.38
CTLA4P16410 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.4■□□□□ 0.38
CTLA4P16410 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.4■□□□□ 0.38
CTLA4P16410 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.4■□□□□ 0.38
CTLA4P16410 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.4■□□□□ 0.38
CTLA4P16410 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CTLA4P16410 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.4■□□□□ 0.38
CTLA4P16410 AC083880.1-201ENST00000608266 535 ntBASIC17.4■□□□□ 0.38
CTLA4P16410 AL109923.1-201ENST00000618799 583 ntBASIC17.4■□□□□ 0.38
CTLA4P16410 HLA-B-256ENST00000639848 1089 ntBASIC17.4■□□□□ 0.38
CTLA4P16410 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTLA4P16410 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CTLA4P16410 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.4■□□□□ 0.38
CTLA4P16410 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTLA4P16410 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.39■□□□□ 0.38
CTLA4P16410 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTLA4P16410 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.39■□□□□ 0.38
CTLA4P16410 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.39■□□□□ 0.38
CTLA4P16410 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 AL032819.2-201ENST00000624543 2162 ntBASIC17.39■□□□□ 0.37
CTLA4P16410 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CTLA4P16410 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CTLA4P16410 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.39■□□□□ 0.37
CTLA4P16410 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTLA4P16410 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTLA4P16410 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.39■□□□□ 0.37
CTLA4P16410 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.39■□□□□ 0.37
CTLA4P16410 RPS2P52-201ENST00000469610 820 ntBASIC17.39■□□□□ 0.37
CTLA4P16410 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CTLA4P16410 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTLA4P16410 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.39■□□□□ 0.37
CTLA4P16410 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.39■□□□□ 0.37
CTLA4P16410 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTLA4P16410 AC018445.3-201ENST00000624177 1945 ntBASIC17.39■□□□□ 0.37
CTLA4P16410 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CTLA4P16410 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.39■□□□□ 0.37
CTLA4P16410 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTLA4P16410 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTLA4P16410 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CTLA4P16410 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTLA4P16410 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTLA4P16410 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTLA4P16410 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTLA4P16410 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTLA4P16410 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms