Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KRT3P12035 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT3P12035 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT3P12035 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT3P12035 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT3P12035 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.68■□□□□ 0.9
KRT3P12035 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT3P12035 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
KRT3P12035 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT3P12035 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KRT3P12035 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
KRT3P12035 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KRT3P12035 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.68■□□□□ 0.9
KRT3P12035 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT3P12035 UNC93B4-201ENST00000505679 747 ntBASIC20.68■□□□□ 0.9
KRT3P12035 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KRT3P12035 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT3P12035 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT3P12035 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT3P12035 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT3P12035 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT3P12035 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
KRT3P12035 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT3P12035 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KRT3P12035 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT3P12035 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT3P12035 UNC93B5-201ENST00000530315 699 ntBASIC20.67■□□□□ 0.9
KRT3P12035 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.67■□□□□ 0.9
KRT3P12035 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.67■□□□□ 0.9
KRT3P12035 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KRT3P12035 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
KRT3P12035 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT3P12035 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT3P12035 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT3P12035 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT3P12035 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT3P12035 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT3P12035 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
KRT3P12035 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.66■□□□□ 0.9
KRT3P12035 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.66■□□□□ 0.9
KRT3P12035 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT3P12035 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KRT3P12035 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT3P12035 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT3P12035 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT3P12035 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
KRT3P12035 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT3P12035 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT3P12035 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT3P12035 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT3P12035 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
KRT3P12035 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT3P12035 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT3P12035 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
KRT3P12035 RNA5SP413-201ENST00000516373 109 ntBASIC20.65■□□□□ 0.9
KRT3P12035 AL121906.2-201ENST00000621597 723 ntBASIC20.65■□□□□ 0.9
KRT3P12035 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT3P12035 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT3P12035 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT3P12035 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT3P12035 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
KRT3P12035 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT3P12035 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KRT3P12035 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
KRT3P12035 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
KRT3P12035 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT3P12035 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms