Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC34.55■■■■□ 3.12
TOP2AP11388 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TOP2AP11388 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TOP2AP11388 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
TOP2AP11388 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TOP2AP11388 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12
TOP2AP11388 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TOP2AP11388 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC34.54■■■■□ 3.12
TOP2AP11388 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC34.54■■■■□ 3.12
TOP2AP11388 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC34.54■■■■□ 3.12
TOP2AP11388 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC34.54■■■■□ 3.12
TOP2AP11388 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
TOP2AP11388 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC34.53■■■■□ 3.12
TOP2AP11388 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
TOP2AP11388 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
TOP2AP11388 AC092647.4-201ENST00000457211 535 ntBASIC34.53■■■■□ 3.12
TOP2AP11388 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC34.53■■■■□ 3.12
TOP2AP11388 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
TOP2AP11388 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC34.53■■■■□ 3.12
TOP2AP11388 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
TOP2AP11388 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
TOP2AP11388 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC34.53■■■■□ 3.12
TOP2AP11388 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC34.53■■■■□ 3.12
TOP2AP11388 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
TOP2AP11388 AP001271.2-201ENST00000624018 1556 ntBASIC34.52■■■■□ 3.12
TOP2AP11388 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
TOP2AP11388 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC34.52■■■■□ 3.12
TOP2AP11388 MED25-212ENST00000618715 1467 ntTSL 5 BASIC34.52■■■■□ 3.12
TOP2AP11388 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC34.52■■■■□ 3.12
TOP2AP11388 AC079834.2-201ENST00000609776 1949 ntBASIC34.52■■■■□ 3.12
TOP2AP11388 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
TOP2AP11388 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
TOP2AP11388 NME1-207ENST00000480143 964 ntTSL 2 BASIC34.52■■■■□ 3.12
TOP2AP11388 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC34.52■■■■□ 3.12
TOP2AP11388 AL023973.1-201ENST00000624619 620 ntBASIC34.52■■■■□ 3.12
TOP2AP11388 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
TOP2AP11388 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC34.52■■■■□ 3.12
TOP2AP11388 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC34.51■■■■□ 3.12
TOP2AP11388 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC34.51■■■■□ 3.12
TOP2AP11388 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC34.51■■■■□ 3.12
TOP2AP11388 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC34.51■■■■□ 3.12
TOP2AP11388 KRT18P38-201ENST00000449496 1282 ntBASIC34.51■■■■□ 3.12
TOP2AP11388 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC34.51■■■■□ 3.12
TOP2AP11388 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC34.51■■■■□ 3.12
TOP2AP11388 AC116407.4-201ENST00000623319 1061 ntBASIC34.51■■■■□ 3.12
TOP2AP11388 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
TOP2AP11388 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC34.51■■■■□ 3.12
TOP2AP11388 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC34.51■■■■□ 3.11
TOP2AP11388 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.11
TOP2AP11388 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
TOP2AP11388 CD320-202ENST00000537716 1119 ntTSL 2 BASIC34.5■■■■□ 3.11
TOP2AP11388 AC011558.1-201ENST00000623459 338 ntBASIC34.5■■■■□ 3.11
TOP2AP11388 SMG8-203ENST00000578922 2178 ntBASIC34.5■■■■□ 3.11
TOP2AP11388 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC34.5■■■■□ 3.11
TOP2AP11388 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC34.5■■■■□ 3.11
TOP2AP11388 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
TOP2AP11388 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
TOP2AP11388 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
TOP2AP11388 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC34.5■■■■□ 3.11
TOP2AP11388 AC005332.1-201ENST00000577698 1310 ntBASIC34.5■■■■□ 3.11
TOP2AP11388 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
TOP2AP11388 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC34.5■■■■□ 3.11
TOP2AP11388 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC34.5■■■■□ 3.11
TOP2AP11388 AP003041.3-201ENST00000527151 707 ntBASIC34.5■■■■□ 3.11
TOP2AP11388 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC34.5■■■■□ 3.11
TOP2AP11388 CKBP1-201ENST00000565489 1086 ntBASIC34.5■■■■□ 3.11
TOP2AP11388 AL160286.2-201ENST00000567150 934 ntBASIC34.5■■■■□ 3.11
TOP2AP11388 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC34.5■■■■□ 3.11
TOP2AP11388 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
TOP2AP11388 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
TOP2AP11388 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
TOP2AP11388 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC34.49■■■■□ 3.11
TOP2AP11388 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC34.49■■■■□ 3.11
TOP2AP11388 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC34.49■■■■□ 3.11
TOP2AP11388 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC34.49■■■■□ 3.11
TOP2AP11388 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
TOP2AP11388 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
TOP2AP11388 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
TOP2AP11388 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
TOP2AP11388 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
TOP2AP11388 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC34.49■■■■□ 3.11
TOP2AP11388 AL121894.2-201ENST00000602977 491 ntBASIC34.49■■■■□ 3.11
TOP2AP11388 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC34.49■■■■□ 3.11
TOP2AP11388 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC34.49■■■■□ 3.11
TOP2AP11388 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC34.49■■■■□ 3.11
TOP2AP11388 MOK-225ENST00000522867 1883 ntTSL 5 BASIC34.49■■■■□ 3.11
TOP2AP11388 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
TOP2AP11388 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
TOP2AP11388 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
TOP2AP11388 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
TOP2AP11388 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC34.48■■■■□ 3.11
TOP2AP11388 PCED1CP-201ENST00000419887 785 ntBASIC34.48■■■■□ 3.11
TOP2AP11388 AL671277.2-201ENST00000458060 996 ntBASIC34.48■■■■□ 3.11
TOP2AP11388 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC34.48■■■■□ 3.11
TOP2AP11388 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
TOP2AP11388 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
TOP2AP11388 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC34.48■■■■□ 3.11
TOP2AP11388 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC34.48■■■■□ 3.11
TOP2AP11388 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
TOP2AP11388 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC34.48■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms