Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SP9P0CG40 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SP9P0CG40 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.44■□□□□ 0.7
SP9P0CG40 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SP9P0CG40 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SP9P0CG40 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.43■□□□□ 0.7
SP9P0CG40 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SP9P0CG40 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SP9P0CG40 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.43■□□□□ 0.7
SP9P0CG40 SPDYE13P-201ENST00000445314 798 ntBASIC19.43■□□□□ 0.7
SP9P0CG40 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SP9P0CG40 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.43■□□□□ 0.7
SP9P0CG40 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.43■□□□□ 0.7
SP9P0CG40 C9orf163-202ENST00000624034 2573 ntBASIC19.43■□□□□ 0.7
SP9P0CG40 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SP9P0CG40 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.42■□□□□ 0.7
SP9P0CG40 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SP9P0CG40 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SP9P0CG40 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SP9P0CG40 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SP9P0CG40 AL022342.1-201ENST00000400363 863 ntBASIC19.42■□□□□ 0.7
SP9P0CG40 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SP9P0CG40 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.42■□□□□ 0.7
SP9P0CG40 NEK4P2-201ENST00000580004 1012 ntBASIC19.42■□□□□ 0.7
SP9P0CG40 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SP9P0CG40 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.42■□□□□ 0.7
SP9P0CG40 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SP9P0CG40 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SP9P0CG40 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.42■□□□□ 0.7
SP9P0CG40 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SP9P0CG40 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SP9P0CG40 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.41■□□□□ 0.7
SP9P0CG40 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.41■□□□□ 0.7
SP9P0CG40 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SP9P0CG40 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.41■□□□□ 0.7
SP9P0CG40 SPDYE15P-201ENST00000424157 909 ntBASIC19.41■□□□□ 0.7
SP9P0CG40 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.41■□□□□ 0.7
SP9P0CG40 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.41■□□□□ 0.7
SP9P0CG40 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.41■□□□□ 0.7
SP9P0CG40 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SP9P0CG40 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SP9P0CG40 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.4■□□□□ 0.7
SP9P0CG40 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SP9P0CG40 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
SP9P0CG40 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SP9P0CG40 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.4■□□□□ 0.7
SP9P0CG40 AC009078.2-202ENST00000463353 338 ntBASIC19.4■□□□□ 0.7
SP9P0CG40 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.4■□□□□ 0.7
SP9P0CG40 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.4■□□□□ 0.7
SP9P0CG40 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SP9P0CG40 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.4■□□□□ 0.7
SP9P0CG40 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.4■□□□□ 0.7
SP9P0CG40 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SP9P0CG40 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.4■□□□□ 0.7
SP9P0CG40 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SP9P0CG40 AL121603.2-201ENST00000557373 2117 ntBASIC19.4■□□□□ 0.7
SP9P0CG40 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.4■□□□□ 0.7
SP9P0CG40 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SP9P0CG40 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SP9P0CG40 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SP9P0CG40 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.39■□□□□ 0.69
SP9P0CG40 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.39■□□□□ 0.69
SP9P0CG40 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.39■□□□□ 0.69
SP9P0CG40 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.39■□□□□ 0.69
SP9P0CG40 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
SP9P0CG40 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
SP9P0CG40 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SP9P0CG40 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SP9P0CG40 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SP9P0CG40 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SP9P0CG40 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SP9P0CG40 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SP9P0CG40 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
SP9P0CG40 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SP9P0CG40 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SP9P0CG40 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SP9P0CG40 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SP9P0CG40 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.38■□□□□ 0.69
SP9P0CG40 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.38■□□□□ 0.69
SP9P0CG40 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.38■□□□□ 0.69
SP9P0CG40 AL645929.1-201ENST00000420084 975 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms