Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A2P08572 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A2P08572 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A2P08572 BX664615.1-201ENST00000443558 458 ntBASIC19.9■□□□□ 0.78
COL4A2P08572 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.9■□□□□ 0.78
COL4A2P08572 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.9■□□□□ 0.78
COL4A2P08572 AL121956.5-201ENST00000625261 221 ntBASIC19.9■□□□□ 0.78
COL4A2P08572 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A2P08572 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A2P08572 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A2P08572 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.9■□□□□ 0.78
COL4A2P08572 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL4A2P08572 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A2P08572 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.9■□□□□ 0.78
COL4A2P08572 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A2P08572 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
COL4A2P08572 TSPY17P-201ENST00000450329 467 ntBASIC19.9■□□□□ 0.78
COL4A2P08572 CA15P1-201ENST00000481698 905 ntBASIC19.9■□□□□ 0.78
COL4A2P08572 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.9■□□□□ 0.78
COL4A2P08572 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.9■□□□□ 0.78
COL4A2P08572 AC130371.2-201ENST00000619443 611 ntBASIC19.9■□□□□ 0.78
COL4A2P08572 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A2P08572 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL4A2P08572 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL4A2P08572 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A2P08572 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.89■□□□□ 0.77
COL4A2P08572 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A2P08572 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A2P08572 AP003041.3-201ENST00000527151 707 ntBASIC19.89■□□□□ 0.77
COL4A2P08572 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.89■□□□□ 0.77
COL4A2P08572 AL441883.1-201ENST00000566170 1045 ntBASIC19.89■□□□□ 0.77
COL4A2P08572 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.89■□□□□ 0.77
COL4A2P08572 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A2P08572 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.89■□□□□ 0.77
COL4A2P08572 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.89■□□□□ 0.77
COL4A2P08572 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A2P08572 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A2P08572 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A2P08572 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.89■□□□□ 0.77
COL4A2P08572 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.89■□□□□ 0.77
COL4A2P08572 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.88■□□□□ 0.77
COL4A2P08572 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.88■□□□□ 0.77
COL4A2P08572 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL4A2P08572 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.88■□□□□ 0.77
COL4A2P08572 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.88■□□□□ 0.77
COL4A2P08572 TSPY5P-201ENST00000426936 936 ntBASIC19.88■□□□□ 0.77
COL4A2P08572 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.88■□□□□ 0.77
COL4A2P08572 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.88■□□□□ 0.77
COL4A2P08572 AL023973.1-201ENST00000624619 620 ntBASIC19.88■□□□□ 0.77
COL4A2P08572 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL4A2P08572 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.88■□□□□ 0.77
COL4A2P08572 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A2P08572 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COL4A2P08572 PCED1CP-201ENST00000419887 785 ntBASIC19.88■□□□□ 0.77
COL4A2P08572 KRT18P38-201ENST00000449496 1282 ntBASIC19.88■□□□□ 0.77
COL4A2P08572 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.88■□□□□ 0.77
COL4A2P08572 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.87■□□□□ 0.77
COL4A2P08572 KRT8P41-201ENST00000533985 1514 ntBASIC19.87■□□□□ 0.77
COL4A2P08572 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A2P08572 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A2P08572 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A2P08572 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COL4A2P08572 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A2P08572 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.87■□□□□ 0.77
COL4A2P08572 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COL4A2P08572 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A2P08572 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.87■□□□□ 0.77
COL4A2P08572 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COL4A2P08572 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.87■□□□□ 0.77
COL4A2P08572 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.87■□□□□ 0.77
COL4A2P08572 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.87■□□□□ 0.77
COL4A2P08572 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.87■□□□□ 0.77
COL4A2P08572 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
COL4A2P08572 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A2P08572 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
COL4A2P08572 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A2P08572 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL4A2P08572 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A2P08572 AP001271.2-201ENST00000624018 1556 ntBASIC19.87■□□□□ 0.77
COL4A2P08572 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A2P08572 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A2P08572 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A2P08572 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A2P08572 KRT18P56-201ENST00000507275 550 ntBASIC19.86■□□□□ 0.77
COL4A2P08572 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.86■□□□□ 0.77
COL4A2P08572 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.86■□□□□ 0.77
COL4A2P08572 AC069148.1-201ENST00000608741 768 ntBASIC19.86■□□□□ 0.77
COL4A2P08572 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL4A2P08572 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms