Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 AC092368.3-202ENST00000574180 1591 ntBASIC19.28■□□□□ 0.68
CAPN1P07384 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CAPN1P07384 KRT8P20-201ENST00000423953 1409 ntBASIC19.28■□□□□ 0.68
CAPN1P07384 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CAPN1P07384 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.28■□□□□ 0.68
CAPN1P07384 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.28■□□□□ 0.68
CAPN1P07384 UNC93B4-201ENST00000505679 747 ntBASIC19.28■□□□□ 0.68
CAPN1P07384 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.28■□□□□ 0.68
CAPN1P07384 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.28■□□□□ 0.68
CAPN1P07384 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.28■□□□□ 0.68
CAPN1P07384 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.28■□□□□ 0.68
CAPN1P07384 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CAPN1P07384 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.28■□□□□ 0.68
CAPN1P07384 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.28■□□□□ 0.68
CAPN1P07384 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN1P07384 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN1P07384 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CAPN1P07384 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CAPN1P07384 TREX1-205ENST00000625293 1783 ntBASIC19.27■□□□□ 0.68
CAPN1P07384 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN1P07384 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CAPN1P07384 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN1P07384 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN1P07384 AC142381.4-202ENST00000563973 229 ntBASIC19.27■□□□□ 0.68
CAPN1P07384 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CAPN1P07384 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CAPN1P07384 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CAPN1P07384 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN1P07384 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CAPN1P07384 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN1P07384 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CAPN1P07384 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN1P07384 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN1P07384 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN1P07384 KRT16P6-202ENST00000425692 1426 ntBASIC19.26■□□□□ 0.67
CAPN1P07384 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CAPN1P07384 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN1P07384 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CAPN1P07384 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN1P07384 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.26■□□□□ 0.67
CAPN1P07384 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN1P07384 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN1P07384 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN1P07384 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.26■□□□□ 0.67
CAPN1P07384 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
CAPN1P07384 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.26■□□□□ 0.67
CAPN1P07384 C2orf69P4-201ENST00000565394 541 ntBASIC19.26■□□□□ 0.67
CAPN1P07384 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CAPN1P07384 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CAPN1P07384 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN1P07384 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.25■□□□□ 0.67
CAPN1P07384 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CAPN1P07384 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 AC009237.14-201ENST00000609975 1594 ntBASIC19.25■□□□□ 0.67
CAPN1P07384 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN1P07384 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.25■□□□□ 0.67
CAPN1P07384 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CAPN1P07384 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN1P07384 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN1P07384 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.25■□□□□ 0.67
CAPN1P07384 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CAPN1P07384 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.25■□□□□ 0.67
CAPN1P07384 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CAPN1P07384 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CAPN1P07384 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.25■□□□□ 0.67
CAPN1P07384 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CAPN1P07384 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.25■□□□□ 0.67
CAPN1P07384 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms