Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFBP01127 AL022342.1-201ENST00000400363 863 ntBASIC19.83■□□□□ 0.77
PDGFBP01127 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFBP01127 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDGFBP01127 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.83■□□□□ 0.77
PDGFBP01127 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDGFBP01127 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PDGFBP01127 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFBP01127 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFBP01127 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.82■□□□□ 0.76
PDGFBP01127 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFBP01127 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFBP01127 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.82■□□□□ 0.76
PDGFBP01127 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.82■□□□□ 0.76
PDGFBP01127 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
PDGFBP01127 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFBP01127 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.82■□□□□ 0.76
PDGFBP01127 AC092329.2-201ENST00000598402 547 ntBASIC19.82■□□□□ 0.76
PDGFBP01127 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.82■□□□□ 0.76
PDGFBP01127 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFBP01127 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
PDGFBP01127 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDGFBP01127 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
PDGFBP01127 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFBP01127 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.81■□□□□ 0.76
PDGFBP01127 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
PDGFBP01127 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFBP01127 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PDGFBP01127 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFBP01127 SPDYE15P-201ENST00000424157 909 ntBASIC19.81■□□□□ 0.76
PDGFBP01127 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.81■□□□□ 0.76
PDGFBP01127 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFBP01127 GCSHP2-201ENST00000560971 527 ntBASIC19.81■□□□□ 0.76
PDGFBP01127 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.81■□□□□ 0.76
PDGFBP01127 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.81■□□□□ 0.76
PDGFBP01127 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDGFBP01127 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFBP01127 AL121603.2-201ENST00000557373 2117 ntBASIC19.81■□□□□ 0.76
PDGFBP01127 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.81■□□□□ 0.76
PDGFBP01127 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDGFBP01127 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PDGFBP01127 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFBP01127 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.8■□□□□ 0.76
PDGFBP01127 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFBP01127 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.8■□□□□ 0.76
PDGFBP01127 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFBP01127 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.8■□□□□ 0.76
PDGFBP01127 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFBP01127 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFBP01127 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.8■□□□□ 0.76
PDGFBP01127 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PDGFBP01127 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PDGFBP01127 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFBP01127 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDGFBP01127 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFBP01127 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.79■□□□□ 0.76
PDGFBP01127 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.79■□□□□ 0.76
PDGFBP01127 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.79■□□□□ 0.76
PDGFBP01127 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFBP01127 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFBP01127 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFBP01127 STARP1-201ENST00000397973 869 ntBASIC19.79■□□□□ 0.76
PDGFBP01127 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.79■□□□□ 0.76
PDGFBP01127 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.79■□□□□ 0.76
PDGFBP01127 FAAHP1-202ENST00000446499 1238 ntBASIC19.79■□□□□ 0.76
PDGFBP01127 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.79■□□□□ 0.76
PDGFBP01127 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.79■□□□□ 0.76
PDGFBP01127 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFBP01127 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFBP01127 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDGFBP01127 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PDGFBP01127 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PDGFBP01127 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PDGFBP01127 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDGFBP01127 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
PDGFBP01127 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.78■□□□□ 0.76
PDGFBP01127 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDGFBP01127 AC242852.2-201ENST00000615738 1807 ntBASIC19.78■□□□□ 0.76
PDGFBP01127 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PDGFBP01127 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFBP01127 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFBP01127 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFBP01127 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDGFBP01127 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.77■□□□□ 0.76
PDGFBP01127 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
PDGFBP01127 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PDGFBP01127 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.77■□□□□ 0.76
PDGFBP01127 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.77■□□□□ 0.76
PDGFBP01127 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms