Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TOMM40O96008 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.35■□□□□ 0.05
TOMM40O96008 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.35■□□□□ 0.05
TOMM40O96008 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TOMM40O96008 PHGDH-210ENST00000641115 1638 ntBASIC15.35■□□□□ 0.05
TOMM40O96008 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TOMM40O96008 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TOMM40O96008 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 LTB4R2-202ENST00000528054 3092 ntBASIC15.34■□□□□ 0.05
TOMM40O96008 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TOMM40O96008 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
TOMM40O96008 AC093484.2-201ENST00000580996 2166 ntBASIC15.34■□□□□ 0.05
TOMM40O96008 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.34■□□□□ 0.05
TOMM40O96008 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.34■□□□□ 0.05
TOMM40O96008 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.34■□□□□ 0.05
TOMM40O96008 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.34■□□□□ 0.05
TOMM40O96008 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.34■□□□□ 0.05
TOMM40O96008 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.34■□□□□ 0.05
TOMM40O96008 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TOMM40O96008 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TOMM40O96008 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.34■□□□□ 0.05
TOMM40O96008 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TOMM40O96008 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.34■□□□□ 0.05
TOMM40O96008 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TOMM40O96008 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TOMM40O96008 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TOMM40O96008 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TOMM40O96008 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.33■□□□□ 0.05
TOMM40O96008 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TOMM40O96008 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TOMM40O96008 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TOMM40O96008 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TOMM40O96008 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.33■□□□□ 0.04
TOMM40O96008 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TOMM40O96008 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.33■□□□□ 0.04
TOMM40O96008 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.33■□□□□ 0.04
TOMM40O96008 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.33■□□□□ 0.04
TOMM40O96008 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.33■□□□□ 0.04
TOMM40O96008 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.33■□□□□ 0.04
TOMM40O96008 MIR5787-201ENST00000611784 55 ntBASIC15.33■□□□□ 0.04
TOMM40O96008 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.33■□□□□ 0.04
TOMM40O96008 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TOMM40O96008 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.33■□□□□ 0.04
TOMM40O96008 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.33■□□□□ 0.04
TOMM40O96008 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TOMM40O96008 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.33■□□□□ 0.04
TOMM40O96008 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.33■□□□□ 0.04
TOMM40O96008 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
TOMM40O96008 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TOMM40O96008 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TOMM40O96008 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TOMM40O96008 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.32■□□□□ 0.04
TOMM40O96008 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
TOMM40O96008 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TOMM40O96008 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TOMM40O96008 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 AL162430.1-201ENST00000480705 870 ntBASIC15.32■□□□□ 0.04
TOMM40O96008 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.32■□□□□ 0.04
TOMM40O96008 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.32■□□□□ 0.04
TOMM40O96008 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.32■□□□□ 0.04
TOMM40O96008 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.32■□□□□ 0.04
TOMM40O96008 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.32■□□□□ 0.04
TOMM40O96008 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TOMM40O96008 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms