Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.12■□□□□ 0.33
UPK1BO75841 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
UPK1BO75841 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.12■□□□□ 0.33
UPK1BO75841 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UPK1BO75841 HCG11-201ENST00000411553 5696 ntBASIC17.12■□□□□ 0.33
UPK1BO75841 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
UPK1BO75841 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UPK1BO75841 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.12■□□□□ 0.33
UPK1BO75841 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UPK1BO75841 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 SIRPAP1-201ENST00000448467 1770 ntBASIC17.12■□□□□ 0.33
UPK1BO75841 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
UPK1BO75841 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
UPK1BO75841 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1BO75841 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.11■□□□□ 0.33
UPK1BO75841 FP475955.4-201ENST00000623131 1990 ntBASIC17.11■□□□□ 0.33
UPK1BO75841 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.11■□□□□ 0.33
UPK1BO75841 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UPK1BO75841 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.11■□□□□ 0.33
UPK1BO75841 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.11■□□□□ 0.33
UPK1BO75841 AL117332.1-201ENST00000622628 974 ntBASIC17.11■□□□□ 0.33
UPK1BO75841 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.11■□□□□ 0.33
UPK1BO75841 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UPK1BO75841 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.11■□□□□ 0.33
UPK1BO75841 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.11■□□□□ 0.33
UPK1BO75841 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UPK1BO75841 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
UPK1BO75841 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1BO75841 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
UPK1BO75841 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UPK1BO75841 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.1■□□□□ 0.33
UPK1BO75841 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UPK1BO75841 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.1■□□□□ 0.33
UPK1BO75841 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.1■□□□□ 0.33
UPK1BO75841 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UPK1BO75841 KRT8P36-201ENST00000489121 1440 ntBASIC17.1■□□□□ 0.33
UPK1BO75841 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UPK1BO75841 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1BO75841 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.09■□□□□ 0.33
UPK1BO75841 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1BO75841 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.09■□□□□ 0.33
UPK1BO75841 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.09■□□□□ 0.33
UPK1BO75841 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1BO75841 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.09■□□□□ 0.33
UPK1BO75841 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
UPK1BO75841 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
UPK1BO75841 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1BO75841 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
UPK1BO75841 MIR4508-201ENST00000584178 70 ntBASIC17.09■□□□□ 0.33
UPK1BO75841 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1BO75841 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
UPK1BO75841 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms