Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.9■□□□□ 0.62
PRAMEF4O60810 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.9■□□□□ 0.62
PRAMEF4O60810 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF4O60810 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF4O60810 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAMEF4O60810 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.9■□□□□ 0.62
PRAMEF4O60810 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAMEF4O60810 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
PRAMEF4O60810 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF4O60810 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF4O60810 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF4O60810 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAMEF4O60810 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF4O60810 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PRAMEF4O60810 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.89■□□□□ 0.62
PRAMEF4O60810 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.89■□□□□ 0.62
PRAMEF4O60810 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 RNA5SP413-201ENST00000516373 109 ntBASIC18.89■□□□□ 0.61
PRAMEF4O60810 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PRAMEF4O60810 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF4O60810 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PRAMEF4O60810 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAMEF4O60810 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAMEF4O60810 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PRAMEF4O60810 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.88■□□□□ 0.61
PRAMEF4O60810 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.88■□□□□ 0.61
PRAMEF4O60810 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.88■□□□□ 0.61
PRAMEF4O60810 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRAMEF4O60810 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRAMEF4O60810 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEF4O60810 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF4O60810 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PRAMEF4O60810 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PRAMEF4O60810 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF4O60810 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF4O60810 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF4O60810 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF4O60810 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF4O60810 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.87■□□□□ 0.61
PRAMEF4O60810 KRT18P6-201ENST00000555540 1265 ntBASIC18.87■□□□□ 0.61
PRAMEF4O60810 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.87■□□□□ 0.61
PRAMEF4O60810 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF4O60810 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.87■□□□□ 0.61
PRAMEF4O60810 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAMEF4O60810 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF4O60810 AL121829.2-201ENST00000620908 328 ntBASIC18.87■□□□□ 0.61
PRAMEF4O60810 AL121906.2-201ENST00000621597 723 ntBASIC18.87■□□□□ 0.61
PRAMEF4O60810 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PRAMEF4O60810 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PRAMEF4O60810 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRAMEF4O60810 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAMEF4O60810 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAMEF4O60810 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAMEF4O60810 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 POM121L13P-201ENST00000422362 380 ntBASIC18.86■□□□□ 0.61
PRAMEF4O60810 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
PRAMEF4O60810 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAMEF4O60810 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.86■□□□□ 0.61
PRAMEF4O60810 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.86■□□□□ 0.61
PRAMEF4O60810 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.86■□□□□ 0.61
PRAMEF4O60810 AC233263.1-201ENST00000578059 224 ntBASIC18.86■□□□□ 0.61
PRAMEF4O60810 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAMEF4O60810 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms