Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC112907.3-201ENST00000577781 2400 ntBASIC20.26■□□□□ 0.83
TSPAN3O60637 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
TSPAN3O60637 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN3O60637 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TSPAN3O60637 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
TSPAN3O60637 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 YBX1P10-201ENST00000444752 975 ntBASIC20.25■□□□□ 0.83
TSPAN3O60637 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.25■□□□□ 0.83
TSPAN3O60637 TSPY15P-201ENST00000457163 923 ntBASIC20.25■□□□□ 0.83
TSPAN3O60637 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.25■□□□□ 0.83
TSPAN3O60637 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.25■□□□□ 0.83
TSPAN3O60637 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.25■□□□□ 0.83
TSPAN3O60637 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN3O60637 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.25■□□□□ 0.83
TSPAN3O60637 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TSPAN3O60637 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TSPAN3O60637 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.25■□□□□ 0.83
TSPAN3O60637 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.25■□□□□ 0.83
TSPAN3O60637 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TSPAN3O60637 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 AL353807.1-201ENST00000427475 662 ntBASIC20.24■□□□□ 0.83
TSPAN3O60637 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.24■□□□□ 0.83
TSPAN3O60637 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.24■□□□□ 0.83
TSPAN3O60637 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.24■□□□□ 0.83
TSPAN3O60637 AC073195.1-201ENST00000607241 877 ntBASIC20.24■□□□□ 0.83
TSPAN3O60637 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.24■□□□□ 0.83
TSPAN3O60637 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.24■□□□□ 0.83
TSPAN3O60637 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.24■□□□□ 0.83
TSPAN3O60637 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.24■□□□□ 0.83
TSPAN3O60637 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.24■□□□□ 0.83
TSPAN3O60637 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TSPAN3O60637 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN3O60637 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.23■□□□□ 0.83
TSPAN3O60637 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TSPAN3O60637 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TSPAN3O60637 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.23■□□□□ 0.83
TSPAN3O60637 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN3O60637 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.23■□□□□ 0.83
TSPAN3O60637 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.23■□□□□ 0.83
TSPAN3O60637 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN3O60637 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.23■□□□□ 0.83
TSPAN3O60637 TUBB8P6-201ENST00000436895 1288 ntBASIC20.23■□□□□ 0.83
TSPAN3O60637 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.23■□□□□ 0.83
TSPAN3O60637 KRT18P16-201ENST00000510337 1294 ntBASIC20.23■□□□□ 0.83
TSPAN3O60637 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN3O60637 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.23■□□□□ 0.83
TSPAN3O60637 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN3O60637 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN3O60637 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
TSPAN3O60637 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TSPAN3O60637 KRT17P2-201ENST00000300992 1314 ntBASIC20.23■□□□□ 0.83
TSPAN3O60637 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN3O60637 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.22■□□□□ 0.83
TSPAN3O60637 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.22■□□□□ 0.83
TSPAN3O60637 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.22■□□□□ 0.83
TSPAN3O60637 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 MIR4785-201ENST00000585005 73 ntBASIC20.22■□□□□ 0.83
TSPAN3O60637 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 AC026471.5-201ENST00000615068 467 ntBASIC20.22■□□□□ 0.83
TSPAN3O60637 CR392000.1-201ENST00000624770 1228 ntBASIC20.22■□□□□ 0.83
TSPAN3O60637 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TSPAN3O60637 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.22■□□□□ 0.83
TSPAN3O60637 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.22■□□□□ 0.83
TSPAN3O60637 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN3O60637 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
TSPAN3O60637 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.21■□□□□ 0.83
TSPAN3O60637 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.21■□□□□ 0.83
TSPAN3O60637 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms