Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
GMDSO60547 AC093484.2-201ENST00000580996 2166 ntBASIC17.33■□□□□ 0.36
GMDSO60547 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.33■□□□□ 0.36
GMDSO60547 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GMDSO60547 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.33■□□□□ 0.36
GMDSO60547 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GMDSO60547 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GMDSO60547 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.32■□□□□ 0.36
GMDSO60547 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
GMDSO60547 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.32■□□□□ 0.36
GMDSO60547 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.32■□□□□ 0.36
GMDSO60547 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.32■□□□□ 0.36
GMDSO60547 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.32■□□□□ 0.36
GMDSO60547 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.32■□□□□ 0.36
GMDSO60547 AC105036.2-201ENST00000569468 176 ntBASIC17.32■□□□□ 0.36
GMDSO60547 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.32■□□□□ 0.36
GMDSO60547 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.32■□□□□ 0.36
GMDSO60547 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GMDSO60547 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.32■□□□□ 0.36
GMDSO60547 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GMDSO60547 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
GMDSO60547 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GMDSO60547 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.31■□□□□ 0.36
GMDSO60547 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
GMDSO60547 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.31■□□□□ 0.36
GMDSO60547 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
GMDSO60547 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.31■□□□□ 0.36
GMDSO60547 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.31■□□□□ 0.36
GMDSO60547 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.31■□□□□ 0.36
GMDSO60547 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.31■□□□□ 0.36
GMDSO60547 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.31■□□□□ 0.36
GMDSO60547 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 AL121832.2-201ENST00000610979 668 ntBASIC17.31■□□□□ 0.36
GMDSO60547 AL589743.5-201ENST00000616611 1050 ntBASIC17.31■□□□□ 0.36
GMDSO60547 AL050303.2-201ENST00000619798 666 ntBASIC17.31■□□□□ 0.36
GMDSO60547 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.31■□□□□ 0.36
GMDSO60547 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.31■□□□□ 0.36
GMDSO60547 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GMDSO60547 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.31■□□□□ 0.36
GMDSO60547 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GMDSO60547 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GMDSO60547 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GMDSO60547 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GMDSO60547 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.3■□□□□ 0.36
GMDSO60547 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
GMDSO60547 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GMDSO60547 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.3■□□□□ 0.36
GMDSO60547 AC093787.1-201ENST00000450396 207 ntBASIC17.3■□□□□ 0.36
GMDSO60547 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.3■□□□□ 0.36
GMDSO60547 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.3■□□□□ 0.36
GMDSO60547 AC105020.6-201ENST00000621523 1217 ntBASIC17.3■□□□□ 0.36
GMDSO60547 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.3■□□□□ 0.36
GMDSO60547 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
GMDSO60547 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 MKRN4P-201ENST00000444706 1521 ntBASIC17.3■□□□□ 0.36
GMDSO60547 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GMDSO60547 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.3■□□□□ 0.36
GMDSO60547 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GMDSO60547 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GMDSO60547 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GMDSO60547 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GMDSO60547 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GMDSO60547 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
GMDSO60547 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GMDSO60547 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms