Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL032819.2-201ENST00000624543 2162 ntBASIC19.52■□□□□ 0.72
PHGDHO43175 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.52■□□□□ 0.72
PHGDHO43175 BX276092.2-201ENST00000417668 665 ntBASIC19.52■□□□□ 0.72
PHGDHO43175 AF201337.1-201ENST00000520239 748 ntBASIC19.52■□□□□ 0.72
PHGDHO43175 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.52■□□□□ 0.72
PHGDHO43175 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.52■□□□□ 0.72
PHGDHO43175 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.52■□□□□ 0.72
PHGDHO43175 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PHGDHO43175 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PHGDHO43175 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.52■□□□□ 0.71
PHGDHO43175 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PHGDHO43175 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PHGDHO43175 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PHGDHO43175 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PHGDHO43175 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.52■□□□□ 0.71
PHGDHO43175 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PHGDHO43175 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PHGDHO43175 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PHGDHO43175 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PHGDHO43175 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PHGDHO43175 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.51■□□□□ 0.71
PHGDHO43175 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHGDHO43175 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.51■□□□□ 0.71
PHGDHO43175 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.51■□□□□ 0.71
PHGDHO43175 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.51■□□□□ 0.71
PHGDHO43175 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
PHGDHO43175 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PHGDHO43175 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PHGDHO43175 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHGDHO43175 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PHGDHO43175 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHGDHO43175 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.5■□□□□ 0.71
PHGDHO43175 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHGDHO43175 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.5■□□□□ 0.71
PHGDHO43175 AC018553.1-201ENST00000616682 1458 ntBASIC19.5■□□□□ 0.71
PHGDHO43175 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHGDHO43175 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PHGDHO43175 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.5■□□□□ 0.71
PHGDHO43175 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.5■□□□□ 0.71
PHGDHO43175 AC026185.1-201ENST00000445748 174 ntBASIC19.5■□□□□ 0.71
PHGDHO43175 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.5■□□□□ 0.71
PHGDHO43175 AL137784.2-201ENST00000607332 1000 ntBASIC19.5■□□□□ 0.71
PHGDHO43175 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHGDHO43175 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHGDHO43175 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PHGDHO43175 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PHGDHO43175 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.5■□□□□ 0.71
PHGDHO43175 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.5■□□□□ 0.71
PHGDHO43175 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHGDHO43175 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHGDHO43175 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PHGDHO43175 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.49■□□□□ 0.71
PHGDHO43175 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.49■□□□□ 0.71
PHGDHO43175 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.49■□□□□ 0.71
PHGDHO43175 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.49■□□□□ 0.71
PHGDHO43175 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PHGDHO43175 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.49■□□□□ 0.71
PHGDHO43175 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PHGDHO43175 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 CROCCP5-201ENST00000436658 830 ntBASIC19.49■□□□□ 0.71
PHGDHO43175 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.49■□□□□ 0.71
PHGDHO43175 RAP2CP1-201ENST00000605103 478 ntBASIC19.49■□□□□ 0.71
PHGDHO43175 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
PHGDHO43175 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PHGDHO43175 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 TNXA-203ENST00000507684 2038 ntBASIC19.49■□□□□ 0.71
PHGDHO43175 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.49■□□□□ 0.71
PHGDHO43175 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PHGDHO43175 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PHGDHO43175 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms