Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RTCAO00442 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTCAO00442 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RTCAO00442 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.73■□□□□ 0.59
RTCAO00442 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.73■□□□□ 0.59
RTCAO00442 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.73■□□□□ 0.59
RTCAO00442 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.73■□□□□ 0.59
RTCAO00442 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.73■□□□□ 0.59
RTCAO00442 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RTCAO00442 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.73■□□□□ 0.59
RTCAO00442 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.73■□□□□ 0.59
RTCAO00442 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTCAO00442 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.73■□□□□ 0.59
RTCAO00442 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RTCAO00442 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RTCAO00442 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.72■□□□□ 0.59
RTCAO00442 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.72■□□□□ 0.59
RTCAO00442 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.72■□□□□ 0.59
RTCAO00442 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
RTCAO00442 CD99P1-205ENST00000527459 561 ntBASIC18.72■□□□□ 0.59
RTCAO00442 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.72■□□□□ 0.59
RTCAO00442 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.72■□□□□ 0.59
RTCAO00442 MIR4651-201ENST00000582622 73 ntBASIC18.72■□□□□ 0.59
RTCAO00442 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.72■□□□□ 0.59
RTCAO00442 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RTCAO00442 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTCAO00442 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTCAO00442 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RTCAO00442 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTCAO00442 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTCAO00442 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.71■□□□□ 0.59
RTCAO00442 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTCAO00442 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RTCAO00442 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTCAO00442 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.71■□□□□ 0.59
RTCAO00442 POM121L13P-201ENST00000422362 380 ntBASIC18.71■□□□□ 0.59
RTCAO00442 AC026366.1-201ENST00000488803 879 ntBASIC18.71■□□□□ 0.59
RTCAO00442 AC233263.1-201ENST00000578059 224 ntBASIC18.71■□□□□ 0.59
RTCAO00442 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTCAO00442 AL121906.2-201ENST00000621597 723 ntBASIC18.71■□□□□ 0.59
RTCAO00442 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTCAO00442 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.71■□□□□ 0.59
RTCAO00442 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTCAO00442 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RTCAO00442 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.71■□□□□ 0.59
RTCAO00442 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.71■□□□□ 0.58
RTCAO00442 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.7■□□□□ 0.58
RTCAO00442 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RTCAO00442 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
RTCAO00442 ESRRAP1-201ENST00000400596 1257 ntBASIC18.7■□□□□ 0.58
RTCAO00442 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.7■□□□□ 0.58
RTCAO00442 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.7■□□□□ 0.58
RTCAO00442 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
RTCAO00442 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.7■□□□□ 0.58
RTCAO00442 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.7■□□□□ 0.58
RTCAO00442 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RTCAO00442 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTCAO00442 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.69■□□□□ 0.58
RTCAO00442 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.69■□□□□ 0.58
RTCAO00442 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTCAO00442 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms