Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.23■□□□□ 0.67
EIF3FO00303 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
EIF3FO00303 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EIF3FO00303 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.23■□□□□ 0.67
EIF3FO00303 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EIF3FO00303 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.22■□□□□ 0.67
EIF3FO00303 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.22■□□□□ 0.67
EIF3FO00303 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.22■□□□□ 0.67
EIF3FO00303 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.22■□□□□ 0.67
EIF3FO00303 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.22■□□□□ 0.67
EIF3FO00303 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
EIF3FO00303 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
EIF3FO00303 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EIF3FO00303 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
EIF3FO00303 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EIF3FO00303 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.21■□□□□ 0.67
EIF3FO00303 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.21■□□□□ 0.67
EIF3FO00303 AP003097.1-201ENST00000530657 1135 ntBASIC19.21■□□□□ 0.67
EIF3FO00303 KRT18P6-201ENST00000555540 1265 ntBASIC19.21■□□□□ 0.67
EIF3FO00303 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.21■□□□□ 0.67
EIF3FO00303 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.21■□□□□ 0.67
EIF3FO00303 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.21■□□□□ 0.67
EIF3FO00303 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
EIF3FO00303 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EIF3FO00303 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EIF3FO00303 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.21■□□□□ 0.67
EIF3FO00303 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.2■□□□□ 0.66
EIF3FO00303 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
EIF3FO00303 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.2■□□□□ 0.66
EIF3FO00303 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.2■□□□□ 0.66
EIF3FO00303 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.2■□□□□ 0.66
EIF3FO00303 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.2■□□□□ 0.66
EIF3FO00303 AC008403.3-201ENST00000598924 454 ntBASIC19.2■□□□□ 0.66
EIF3FO00303 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.2■□□□□ 0.66
EIF3FO00303 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EIF3FO00303 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
EIF3FO00303 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EIF3FO00303 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EIF3FO00303 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EIF3FO00303 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EIF3FO00303 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EIF3FO00303 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
EIF3FO00303 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.19■□□□□ 0.66
EIF3FO00303 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
EIF3FO00303 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.19■□□□□ 0.66
EIF3FO00303 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.19■□□□□ 0.66
EIF3FO00303 AC026366.1-201ENST00000488803 879 ntBASIC19.19■□□□□ 0.66
EIF3FO00303 RNA5SP413-201ENST00000516373 109 ntBASIC19.19■□□□□ 0.66
EIF3FO00303 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.19■□□□□ 0.66
EIF3FO00303 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EIF3FO00303 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EIF3FO00303 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
EIF3FO00303 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
EIF3FO00303 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EIF3FO00303 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EIF3FO00303 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.18■□□□□ 0.66
EIF3FO00303 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EIF3FO00303 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.18■□□□□ 0.66
EIF3FO00303 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.18■□□□□ 0.66
EIF3FO00303 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.18■□□□□ 0.66
EIF3FO00303 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EIF3FO00303 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.18■□□□□ 0.66
EIF3FO00303 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.18■□□□□ 0.66
EIF3FO00303 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms