Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.12■■□□□ 1.13
DDX39AO00148 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.12■■□□□ 1.13
DDX39AO00148 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.12■■□□□ 1.13
DDX39AO00148 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.12■■□□□ 1.13
DDX39AO00148 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.12■■□□□ 1.13
DDX39AO00148 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DDX39AO00148 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX39AO00148 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.11■■□□□ 1.13
DDX39AO00148 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
DDX39AO00148 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
DDX39AO00148 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
DDX39AO00148 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
DDX39AO00148 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.11■■□□□ 1.13
DDX39AO00148 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.11■■□□□ 1.13
DDX39AO00148 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.11■■□□□ 1.13
DDX39AO00148 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
DDX39AO00148 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
DDX39AO00148 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
DDX39AO00148 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.11■■□□□ 1.13
DDX39AO00148 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX39AO00148 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX39AO00148 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
DDX39AO00148 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX39AO00148 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
DDX39AO00148 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX39AO00148 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.1■■□□□ 1.13
DDX39AO00148 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX39AO00148 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.1■■□□□ 1.13
DDX39AO00148 CD177P1-201ENST00000606252 935 ntBASIC22.1■■□□□ 1.13
DDX39AO00148 AP001271.2-201ENST00000624018 1556 ntBASIC22.1■■□□□ 1.13
DDX39AO00148 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.1■■□□□ 1.13
DDX39AO00148 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
DDX39AO00148 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX39AO00148 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX39AO00148 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX39AO00148 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX39AO00148 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
DDX39AO00148 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX39AO00148 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
DDX39AO00148 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX39AO00148 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX39AO00148 AL353807.1-201ENST00000427475 662 ntBASIC22.09■■□□□ 1.13
DDX39AO00148 TUBB8P6-201ENST00000436895 1288 ntBASIC22.09■■□□□ 1.13
DDX39AO00148 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.09■■□□□ 1.13
DDX39AO00148 TSPY15P-201ENST00000457163 923 ntBASIC22.09■■□□□ 1.13
DDX39AO00148 KRT18P16-201ENST00000510337 1294 ntBASIC22.09■■□□□ 1.13
DDX39AO00148 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.09■■□□□ 1.13
DDX39AO00148 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
DDX39AO00148 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX39AO00148 LINC01521-201ENST00000504184 1943 ntBASIC22.09■■□□□ 1.13
DDX39AO00148 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX39AO00148 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX39AO00148 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX39AO00148 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
DDX39AO00148 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.08■■□□□ 1.13
DDX39AO00148 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 TCF3P1-201ENST00000423021 1937 ntBASIC22.08■■□□□ 1.13
DDX39AO00148 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.08■■□□□ 1.13
DDX39AO00148 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX39AO00148 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX39AO00148 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX39AO00148 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.08■■□□□ 1.13
DDX39AO00148 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.08■■□□□ 1.13
DDX39AO00148 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX39AO00148 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX39AO00148 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.08■■□□□ 1.13
DDX39AO00148 C1QL1P1-201ENST00000568105 661 ntBASIC22.08■■□□□ 1.13
DDX39AO00148 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.08■■□□□ 1.13
DDX39AO00148 AC073195.1-201ENST00000607241 877 ntBASIC22.08■■□□□ 1.13
DDX39AO00148 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX39AO00148 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms