Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 MFAP1P1-201ENST00000442257 1255 ntBASIC19.24■□□□□ 0.67
C4orf47A7E2U8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 AC011298.2-201ENST00000617989 482 ntBASIC19.24■□□□□ 0.67
C4orf47A7E2U8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C4orf47A7E2U8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.23■□□□□ 0.67
C4orf47A7E2U8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 AC007663.1-201ENST00000438948 1240 ntBASIC19.23■□□□□ 0.67
C4orf47A7E2U8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.23■□□□□ 0.67
C4orf47A7E2U8 AL691432.3-201ENST00000621860 400 ntBASIC19.23■□□□□ 0.67
C4orf47A7E2U8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
C4orf47A7E2U8 RCC2P6-201ENST00000526625 1557 ntBASIC19.23■□□□□ 0.67
C4orf47A7E2U8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 SLC25A1P2-201ENST00000430693 912 ntBASIC19.22■□□□□ 0.67
C4orf47A7E2U8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 AL671277.2-201ENST00000458060 996 ntBASIC19.22■□□□□ 0.67
C4orf47A7E2U8 AC008040.2-201ENST00000461049 708 ntBASIC19.22■□□□□ 0.67
C4orf47A7E2U8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 AC010653.2-201ENST00000623505 997 ntBASIC19.22■□□□□ 0.67
C4orf47A7E2U8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 AF106564.1-201ENST00000607058 2553 ntBASIC19.22■□□□□ 0.67
C4orf47A7E2U8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.22■□□□□ 0.67
C4orf47A7E2U8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 HOMER2P1-201ENST00000455653 964 ntBASIC19.21■□□□□ 0.67
C4orf47A7E2U8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 AL359075.1-203ENST00000462729 1002 ntBASIC19.21■□□□□ 0.67
C4orf47A7E2U8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 AL031432.5-201ENST00000641059 760 ntBASIC19.21■□□□□ 0.67
C4orf47A7E2U8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C4orf47A7E2U8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C4orf47A7E2U8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms