Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 AL356289.3-201ENST00000640049 2669 ntBASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
PCDHB13Q9Y5F0 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
PCDHB13Q9Y5F0 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
PCDHB13Q9Y5F0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
PCDHB13Q9Y5F0 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
PCDHB13Q9Y5F0 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC9.27□□□□□ -0.92
PCDHB13Q9Y5F0 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
PCDHB13Q9Y5F0 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.92
PCDHB13Q9Y5F0 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
PCDHB13Q9Y5F0 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 Y_RNA.180-201ENST00000363867 113 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 RNU6-266P-201ENST00000364225 107 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 Y_RNA.350-201ENST00000365409 98 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 RN7SKP232-201ENST00000410170 290 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 RN7SKP127-201ENST00000410443 354 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 RNU4-6P-201ENST00000410804 122 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 RN7SKP144-201ENST00000411108 279 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 VN2R10P-201ENST00000411871 853 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 FKBP1AP3-201ENST00000423650 319 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 OR2AS1P-201ENST00000427827 319 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 HMGB1P9-201ENST00000429856 646 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AL606752.1-201ENST00000435442 666 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC009237.4-201ENST00000441078 238 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 MTCO3P45-201ENST00000443036 613 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 ARL2BPP7-201ENST00000446421 490 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 PRPF38AP1-201ENST00000451976 933 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC002553.2-201ENST00000453217 340 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 PCMTD1P1-201ENST00000455560 355 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 RPSAP51-201ENST00000497462 645 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC111193.1-201ENST00000504097 155 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 RNU6-1088P-201ENST00000516850 104 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 RNU6-182P-201ENST00000516970 105 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 ATP6V1G1P2-201ENST00000522436 346 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AP001804.3-201ENST00000525146 880 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC073913.2-201ENST00000541512 145 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AL078601.3-201ENST00000573303 535 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AF038458.1-201ENST00000588406 262 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 BNIP3P16-201ENST00000589779 534 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC026634.1-201ENST00000634369 198 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC010149.2-201ENST00000637608 315 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 ATM-230ENST00000640388 578 ntTSL 5 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 RPL12P38-202ENST00000588627 2319 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC073349.2-201ENST00000427545 1603 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AL512504.2-201ENST00000445455 1909 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AC068870.3-201ENST00000625077 2536 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 AL049833.3-201ENST00000623920 3738 ntBASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PCDHB13Q9Y5F0 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 ASAP1-IT2-201ENST00000626977 2031 ntBASIC9.26□□□□□ -0.93
PCDHB13Q9Y5F0 CASC19-260ENST00000641828 2001 ntBASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms