Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC007494.1-201ENST00000562293 760 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC106785.3-201ENST00000564064 847 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC079148.1-201ENST00000565944 819 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC015911.5-201ENST00000587076 451 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 VN1R81P-201ENST00000602085 372 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC068313.1-201ENST00000604028 1008 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 RNA5SP440-201ENST00000612665 119 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC109809.1-201ENST00000619665 545 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AP000943.4-201ENST00000622912 357 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 LINC00216-201ENST00000623548 1126 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AC097520.1-201ENST00000624435 385 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 PDZK1P1-202ENST00000425209 1350 ntBASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX2IPQ9Y2D8 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC024587.1-201ENST00000505925 2157 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 RNA5SP375-201ENST00000362975 119 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 MTATP6P31-201ENST00000406985 692 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 EIF2S2P5-201ENST00000457635 968 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC090589.1-201ENST00000473109 362 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 UBFD1P1-201ENST00000473259 814 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 OR2A3P-201ENST00000493774 953 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC068339.2-201ENST00000534395 618 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC090022.1-201ENST00000546569 311 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC022404.1-201ENST00000555320 273 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC010547.6-201ENST00000571789 193 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC093388.1-201ENST00000609166 430 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 MIR6826-201ENST00000617808 98 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC074276.2-201ENST00000619891 348 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 MIR193BHG-214ENST00000641765 509 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC020633.1-201ENST00000468439 2247 ntBASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX2IPQ9Y2D8 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AP001541.1-201ENST00000623322 1904 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 RNU6-609P-201ENST00000365459 107 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AMZ2P2-201ENST00000406819 1057 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 NACAP7-201ENST00000407371 609 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 SNRPEP6-201ENST00000407465 277 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 RN7SKP199-201ENST00000410325 305 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 OR2AT2P-201ENST00000413438 905 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 VN1R37P-201ENST00000419096 748 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AK4P4-201ENST00000419465 646 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AL390879.1-201ENST00000439143 386 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 CYCSP51-201ENST00000443545 318 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AC073072.2-201ENST00000447425 348 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 RAB28P2-201ENST00000454299 641 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 RN7SL177P-201ENST00000476596 299 ntBASIC6.4□□□□□ -1.38
SSX2IPQ9Y2D8 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms