Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 OR9K1P-202ENST00000641111 3217 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 RNA5SP433-201ENST00000364491 114 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC004386.1-201ENST00000393214 761 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC002524.1-201ENST00000411687 547 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AL356968.2-201ENST00000412769 1257 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 RPL35AP3-201ENST00000414680 288 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 KIF4CP-201ENST00000422742 1279 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 DEFA9P-201ENST00000433042 285 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC016772.1-201ENST00000444170 1261 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AL122020.1-201ENST00000472287 459 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AP002884.1-201ENST00000479691 655 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 LSM3P4-201ENST00000502948 309 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC016559.2-201ENST00000510759 359 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC024405.1-201ENST00000532521 1042 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC079905.1-201ENST00000549280 475 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC040958.1-201ENST00000561102 201 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AL359715.3-201ENST00000569267 2123 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 FAM27E4-201ENST00000605259 342 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC108673.3-201ENST00000609183 335 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC103703.1-201ENST00000634783 663 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 MFSD8-219ENST00000641228 2559 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 MTCO1P15-201ENST00000529569 1526 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC022417.1-201ENST00000624768 1303 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AC073136.1-201ENST00000449426 2884 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 AL353796.1-201ENST00000561542 3241 ntBASIC5.16□□□□□ -1.58
CCNB1IP1Q9NPC3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCNB1IP1Q9NPC3 IFIT1P1-201ENST00000400497 1449 ntBASIC5.15□□□□□ -1.58
CCNB1IP1Q9NPC3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCNB1IP1Q9NPC3 ADAM5-202ENST00000399789 1942 ntBASIC5.15□□□□□ -1.58
CCNB1IP1Q9NPC3 AC027088.4-201ENST00000611559 1947 ntBASIC5.15□□□□□ -1.58
CCNB1IP1Q9NPC3 SMG1P4-204ENST00000523028 4131 ntBASIC5.15□□□□□ -1.58
CCNB1IP1Q9NPC3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCNB1IP1Q9NPC3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCNB1IP1Q9NPC3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
CCNB1IP1Q9NPC3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 AC113412.1-201ENST00000425840 504 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 HSPD1P12-201ENST00000429127 1069 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 RPL7AP49-201ENST00000429522 581 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 AC126120.1-201ENST00000431082 470 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 AL591438.1-201ENST00000433508 581 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 IGBP1P3-201ENST00000447449 1000 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 RN7SL57P-201ENST00000493687 290 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 RNA5SP340-201ENST00000517132 107 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 AC027369.2-201ENST00000528030 440 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 PMS2P3-207ENST00000529061 717 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 MIR4472-2-201ENST00000582069 67 ntBASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNB1IP1Q9NPC3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms