Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 MIR551A-201ENST00000385042 96 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 CST12P-201ENST00000457644 362 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 RN7SL273P-201ENST00000481561 299 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 RN7SL612P-201ENST00000497704 295 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 NENFP3-201ENST00000503735 313 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AC109464.1-201ENST00000511091 819 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AC116917.1-201ENST00000520558 305 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AC015689.2-201ENST00000528172 1738 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AC027369.5-201ENST00000533838 755 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AC006363.1-201ENST00000603806 463 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 AC018690.1-201ENST00000608144 626 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 HTR1DP1-201ENST00000616500 888 ntBASIC6.63□□□□□ -1.35
UPF2Q9HAU5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.63□□□□□ -1.35
UPF2Q9HAU5 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC123912.3-201ENST00000600907 1367 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 RMRPP5-201ENST00000411156 267 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC068228.1-201ENST00000461723 211 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC069304.1-201ENST00000491593 704 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC106822.1-201ENST00000502647 526 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 RNA5SP340-201ENST00000517132 107 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC100784.1-201ENST00000522790 310 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 BTG1P1-201ENST00000540396 508 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 OR1E3-201ENST00000575608 948 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AP001437.1-201ENST00000608783 456 ntBASIC6.62□□□□□ -1.35
UPF2Q9HAU5 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
UPF2Q9HAU5 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 NR1H5P-201ENST00000452683 1377 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 OR9G4-201ENST00000302957 984 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 SNORA64.1-201ENST00000362600 132 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 RN7SKP250-201ENST00000363924 321 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 RN7SKP153-201ENST00000365026 316 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AL359885.1-201ENST00000415786 903 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 CYCSP24-201ENST00000445119 316 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC091874.2-201ENST00000505889 720 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 LDHAP1-201ENST00000509421 992 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 OR8G3P-201ENST00000533406 921 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms