Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC084373.1-201ENST00000603311 235 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC008555.7-201ENST00000605008 583 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 RPL12P48-201ENST00000605620 304 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC006946.3-201ENST00000609791 756 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AL359513.1-201ENST00000614364 557 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 CYCSP41-201ENST00000616920 296 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 OR6C71P-202ENST00000641886 1107 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 AP002512.4-202ENST00000641599 4530 ntBASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TRIM54Q9BYV2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AL096711.1-201ENST00000404780 554 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 RPA2P2-201ENST00000419698 796 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 ARF4P4-201ENST00000439608 520 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 RPS3AP6-201ENST00000484430 795 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 RPL34P33-201ENST00000486062 334 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 BTG4P1-201ENST00000510421 183 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 TPM3P3-201ENST00000521343 354 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AGGF1P5-201ENST00000567900 919 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 RPP40P2-201ENST00000603596 712 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC009237.12-201ENST00000604755 742 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC141002.1-201ENST00000607025 279 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AL591167.1-201ENST00000607321 456 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 VN1R9P-201ENST00000614184 867 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AL356863.1-201ENST00000623378 1080 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AP000550.3-201ENST00000637734 379 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 NEPNP-201ENST00000404786 1371 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms