Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
KRTAP3-1Q9BYR8 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP3-1Q9BYR8 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 MRE11P1-201ENST00000464884 2127 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 NLRP3P1-201ENST00000622303 1785 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL022334.1-201ENST00000417397 1726 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC245100.2-201ENST00000454544 1679 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC005592.1-201ENST00000566527 1640 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 KPNA2P1-201ENST00000458289 1591 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL138847.1-201ENST00000258651 546 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 CH17-340M24.3-201ENST00000360656 598 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 RNU6-874P-201ENST00000362390 105 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 Y_RNA.288-201ENST00000364854 92 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 RNU6-890P-201ENST00000384121 107 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 UBB-202ENST00000395837 1014 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 NXNP1-201ENST00000397383 1051 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL360182.1-201ENST00000397433 468 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL035467.1-201ENST00000403583 686 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 BZW2-203ENST00000407633 898 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL023773.2-201ENST00000412173 1005 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC021016.1-201ENST00000414167 498 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC080125.1-201ENST00000414888 684 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 FAM213AP1-201ENST00000418757 668 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL023773.1-201ENST00000423985 1124 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 PGAM1P6-201ENST00000425684 747 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL441963.1-201ENST00000435137 792 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 RPL23AP74-201ENST00000437246 471 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC007790.1-201ENST00000439081 782 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC093166.1-201ENST00000442243 330 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 OR7E116P-201ENST00000448529 957 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL683842.1-201ENST00000455505 525 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 SNRPFP3-201ENST00000457792 225 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 RNU7-180P-201ENST00000459240 63 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 APOA2-203ENST00000463812 401 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC092324.1-201ENST00000468671 324 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC010307.2-202ENST00000502776 570 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 HMGB3P17-201ENST00000504195 649 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 RAB5CP2-201ENST00000505368 637 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC116655.1-201ENST00000508324 901 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC109481.1-201ENST00000509173 282 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 TXNP6-201ENST00000510190 310 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AP000867.1-201ENST00000511464 255 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC103719.1-201ENST00000517994 581 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 MTND4P7-201ENST00000523876 130 ntBASIC4.33□□□□□ -1.72
KRTAP3-1Q9BYR8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms