Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC006116.7-201ENST00000590141 756 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 AC006116.5-201ENST00000591936 559 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 AC005261.2-201ENST00000593427 4258 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 NDUFB9P1-201ENST00000604683 510 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 AL450270.1-201ENST00000606160 391 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 AC084036.1-201ENST00000609190 508 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 AC074276.2-201ENST00000619891 348 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 AC097520.1-201ENST00000624435 385 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.42□□□□□ -1.7
VGLL1Q99990 AC007603.3-201ENST00000636915 979 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VGLL1Q99990 OR4G1P-202ENST00000641173 1788 ntBASIC4.42□□□□□ -1.7
VGLL1Q99990 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VGLL1Q99990 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VGLL1Q99990 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.42□□□□□ -1.7
VGLL1Q99990 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VGLL1Q99990 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
VGLL1Q99990 MTCO1P7-201ENST00000419523 1542 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AP004607.3-201ENST00000530354 3915 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 RNU6-40P-201ENST00000384254 107 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 RN7SKP146-201ENST00000410242 334 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 RN7SKP199-201ENST00000410325 305 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.41□□□□□ -1.7
VGLL1Q99990 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.41□□□□□ -1.7
VGLL1Q99990 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AL136231.1-201ENST00000429407 730 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AC242426.1-201ENST00000435270 960 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.41□□□□□ -1.7
VGLL1Q99990 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AC023424.1-201ENST00000496058 459 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.41□□□□□ -1.7
VGLL1Q99990 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.41□□□□□ -1.7
VGLL1Q99990 RNU6-943P-201ENST00000516960 98 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AC113192.3-201ENST00000529152 742 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.41□□□□□ -1.7
VGLL1Q99990 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.41□□□□□ -1.7
VGLL1Q99990 CKS1BP1-201ENST00000555221 240 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.41□□□□□ -1.7
VGLL1Q99990 MT1CP-201ENST00000567054 174 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 AC104072.1-201ENST00000568817 668 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 GARSP1-201ENST00000570895 719 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.41□□□□□ -1.7
VGLL1Q99990 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 AC112503.2-201ENST00000609005 552 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 AC063944.3-201ENST00000609969 533 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 AC241377.1-201ENST00000619797 406 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 AC096708.4-201ENST00000620563 552 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 AC022400.9-201ENST00000623633 273 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 AC010325.3-201ENST00000641084 394 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VGLL1Q99990 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
VGLL1Q99990 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.41□□□□□ -1.7
VGLL1Q99990 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AP001029.2-203ENST00000589795 4910 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 MTCO1P28-201ENST00000574177 1528 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.41□□□□□ -1.7
VGLL1Q99990 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.41□□□□□ -1.7
VGLL1Q99990 AL513548.1-201ENST00000562904 1724 ntBASIC4.41□□□□□ -1.7
VGLL1Q99990 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VGLL1Q99990 MFSD8-239ENST00000641590 2479 ntBASIC4.4□□□□□ -1.7
VGLL1Q99990 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VGLL1Q99990 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.4□□□□□ -1.7
VGLL1Q99990 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
VGLL1Q99990 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VGLL1Q99990 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VGLL1Q99990 RN7SKP78-201ENST00000364711 318 ntBASIC4.4□□□□□ -1.71
VGLL1Q99990 SNORD51.1-201ENST00000365405 77 ntBASIC4.4□□□□□ -1.71
VGLL1Q99990 RNA5SP279-201ENST00000365513 117 ntBASIC4.4□□□□□ -1.71
VGLL1Q99990 RNA5SP91-201ENST00000390902 119 ntBASIC4.4□□□□□ -1.71
VGLL1Q99990 AL589994.1-201ENST00000404962 340 ntBASIC4.4□□□□□ -1.71
VGLL1Q99990 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.4□□□□□ -1.71
VGLL1Q99990 RN7SKP108-201ENST00000411367 328 ntBASIC4.4□□□□□ -1.71
VGLL1Q99990 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.4□□□□□ -1.71
VGLL1Q99990 AC079809.1-201ENST00000415468 276 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms