Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 AC009090.4-201ENST00000623921 3691 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
HLA-CQ95604 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 RNY4P34-201ENST00000364779 95 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
HLA-CQ95604 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
HLA-CQ95604 PEX12P1-201ENST00000400284 1048 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 MIR1266-201ENST00000408125 84 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 RNA5SP498-201ENST00000411342 120 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 RPS7P15-201ENST00000415804 584 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.97□□□□□ -1.13
HLA-CQ95604 FTH1P5-201ENST00000425761 545 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 MTCO3P46-201ENST00000425787 232 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.97□□□□□ -1.13
HLA-CQ95604 RN7SL372P-201ENST00000461982 298 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 RN7SL868P-201ENST00000485915 303 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 RN7SL350P-201ENST00000492591 299 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 AC090638.1-201ENST00000498296 909 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 POU5F1P7-201ENST00000508759 541 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.97□□□□□ -1.13
HLA-CQ95604 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.97□□□□□ -1.13
HLA-CQ95604 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.97□□□□□ -1.13
HLA-CQ95604 CYCSP2-201ENST00000558168 301 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 AC006116.10-201ENST00000591836 581 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 RMST_3.1-201ENST00000611651 109 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 pRNA.12-201ENST00000614353 90 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 pRNA.3-201ENST00000615048 90 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
HLA-CQ95604 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
HLA-CQ95604 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
HLA-CQ95604 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-CQ95604 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
HLA-CQ95604 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-CQ95604 MTND5P1-201ENST00000445440 1375 ntBASIC7.97□□□□□ -1.13
HLA-CQ95604 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
HLA-CQ95604 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.13
HLA-CQ95604 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
HLA-CQ95604 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.96□□□□□ -1.13
HLA-CQ95604 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
HLA-CQ95604 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC7.96□□□□□ -1.13
HLA-CQ95604 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
HLA-CQ95604 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
HLA-CQ95604 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
HLA-CQ95604 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
HLA-CQ95604 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
HLA-CQ95604 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
HLA-CQ95604 MTND5P16-201ENST00000460269 1703 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.96□□□□□ -1.14
HLA-CQ95604 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 U8.3-201ENST00000363321 132 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 Y_RNA.128-201ENST00000363391 112 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.96□□□□□ -1.14
HLA-CQ95604 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 SNORD115.1-201ENST00000391109 76 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 H2AFZP3-201ENST00000394213 387 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 LDHAP5-201ENST00000394996 622 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
HLA-CQ95604 AL136100.1-201ENST00000407696 330 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 MIR548P-201ENST00000408336 84 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 RN7SKP29-201ENST00000410957 272 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AL590806.1-201ENST00000415818 853 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC133104.1-201ENST00000429100 218 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 PUDPP2-201ENST00000431423 643 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AL590682.1-201ENST00000437248 344 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 IPO7P1-201ENST00000442031 636 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 BRK1P2-201ENST00000442875 223 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AL451074.4-201ENST00000447545 470 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AL390728.3-201ENST00000452704 270 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC234771.3-201ENST00000454984 622 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
HLA-CQ95604 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.96□□□□□ -1.14
HLA-CQ95604 RN7SL518P-201ENST00000491887 280 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.96□□□□□ -1.14
HLA-CQ95604 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC7.96□□□□□ -1.14
HLA-CQ95604 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.96□□□□□ -1.14
HLA-CQ95604 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms