Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AC006499.4-201ENST00000510947 694 ntBASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 HMGB1P42-201ENST00000532126 553 ntBASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 NANOGNBP2-201ENST00000544753 553 ntBASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AL138895.2-201ENST00000603019 178 ntBASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 CXADRP3-202ENST00000617265 1100 ntBASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AC138965.3-201ENST00000623875 498 ntBASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 OR9K1P-202ENST00000641111 3217 ntBASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.6□□□□□ -1.67
ZNF439Q8NDP4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 OR52B3P-201ENST00000314715 928 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 LYPLA1P3-201ENST00000402650 695 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AL358178.1-201ENST00000407698 397 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AC006335.2-201ENST00000437993 330 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AC023271.1-201ENST00000445936 1090 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 RPS4XP12-201ENST00000461747 709 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 RN7SL197P-201ENST00000466981 299 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 PFN1P8-201ENST00000497012 543 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 OR4A17P-201ENST00000526032 904 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AP005431.1-201ENST00000618479 319 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 AC087565.3-203ENST00000641018 837 ntBASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZNF439Q8NDP4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ZNF439Q8NDP4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
ZNF439Q8NDP4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
ZNF439Q8NDP4 AC068870.1-201ENST00000563737 2455 ntBASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 HSPA8P14-201ENST00000552265 1805 ntBASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 RNA5SP394-201ENST00000364216 119 ntBASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 RNA5SP131-201ENST00000365452 119 ntBASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 TRAV35-201ENST00000390462 330 ntBASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 HMGB1P20-201ENST00000402555 677 ntBASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 AC079809.1-201ENST00000415468 276 ntBASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 RPL24P2-201ENST00000421023 475 ntBASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 RIMKLBP2-201ENST00000424737 654 ntBASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.58□□□□□ -1.68
ZNF439Q8NDP4 MED28P3-201ENST00000444288 531 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms