Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 RPS7P9-201ENST00000414704 586 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AL139158.1-201ENST00000424719 340 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC234781.2-201ENST00000426370 994 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 RPSAP32-201ENST00000432681 526 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 HSFY3P-201ENST00000444242 1191 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AL020997.1-201ENST00000446554 349 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AL133477.1-201ENST00000457472 514 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 RN7SL39P-201ENST00000462264 297 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC005017.1-201ENST00000482002 490 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 RN7SL741P-201ENST00000482473 289 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC131392.1-201ENST00000506490 633 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 XKRY-201ENST00000510392 1100 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC024909.2-201ENST00000553035 286 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC026956.1-201ENST00000558741 396 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC090695.1-201ENST00000561269 1222 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 RN7SL230P-201ENST00000580835 303 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC004805.3-201ENST00000603178 310 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC124312.4-201ENST00000605533 310 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC009779.8-202ENST00000607990 932 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC012676.3-201ENST00000614983 479 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 SAMM50P1-201ENST00000455403 1399 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC005702.3-201ENST00000585345 1447 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 NXF4-202ENST00000416098 1465 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 DNM1P47-203ENST00000571780 12667 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 UGT2B27P-201ENST00000505092 1620 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 HSPD1P7-201ENST00000447985 1686 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 AC009135.2-201ENST00000624136 1768 ntBASIC6.39□□□□□ -1.39
TRIM48Q8IWZ4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AL021407.1-201ENST00000404531 386 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 THEM7P-201ENST00000419556 672 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC010153.1-201ENST00000432862 727 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 MTND5P2-201ENST00000442927 1142 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 RPL34P26-201ENST00000445636 354 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 OR51B8P-201ENST00000449892 769 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC108734.3-201ENST00000481241 1165 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AL117692.1-201ENST00000494283 713 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AF213884.2-201ENST00000510417 903 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC119751.1-201ENST00000513357 765 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 RNU6-1334P-201ENST00000516032 105 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 MTCYBP20-201ENST00000524239 1129 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC135983.3-201ENST00000528049 1226 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC121758.1-202ENST00000556917 658 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC023968.1-201ENST00000560719 475 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms