Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 AC025574.1-201ENST00000554784 1653 ntBASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC50Q8IVM0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 NEPNP-201ENST00000404786 1371 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 SSXP3-201ENST00000442971 1300 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 GAPDHP24-201ENST00000328713 983 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 RNA5SP30-201ENST00000365552 115 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 SUGT1P2-201ENST00000379452 992 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 MIR1203-201ENST00000408812 85 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 RNU6-233P-201ENST00000410845 141 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 HMGB3P24-201ENST00000433260 622 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 RN7SL188P-201ENST00000469842 285 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AC006499.4-201ENST00000510947 694 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AC127381.1-201ENST00000555979 939 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AC092121.1-201ENST00000569452 202 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AC127024.5-201ENST00000580085 462 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AC009779.8-202ENST00000607990 932 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AL139124.1-201ENST00000609123 421 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 AL591926.1-201ENST00000620542 217 ntBASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC50Q8IVM0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
CCDC50Q8IVM0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
CCDC50Q8IVM0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC50Q8IVM0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
CCDC50Q8IVM0 AC073136.1-201ENST00000449426 2884 ntBASIC5.84□□□□□ -1.48
CCDC50Q8IVM0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
CCDC50Q8IVM0 MUC2-202ENST00000613187 4845 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 ZNF652P1-201ENST00000442420 1309 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 OR7E156P-201ENST00000400303 464 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 RN7SKP286-201ENST00000410894 299 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 RN7SKP97-201ENST00000410966 333 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 RMRPP5-201ENST00000411156 267 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 RPSAP35-201ENST00000413753 818 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 RPL7P56-201ENST00000429441 717 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 AC073465.2-201ENST00000440938 498 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 HLA-DPA3-207ENST00000454398 229 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 RPL37P23-201ENST00000492641 294 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 NENFP3-201ENST00000503735 313 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 SETP1-201ENST00000556014 845 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 AL596275.2-207ENST00000641188 675 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 MT-RNR2-201ENST00000387347 1559 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 Z95331.1-201ENST00000623075 23112 ntBASIC5.83□□□□□ -1.48
CCDC50Q8IVM0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCDC50Q8IVM0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms