Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AL121977.1-201ENST00000401636 979 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 NPM1P4-201ENST00000414095 812 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 GTF3AP1-201ENST00000416942 1004 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 PRUNEP1-201ENST00000425846 705 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AC073410.1-201ENST00000435125 589 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 RSU1P1-201ENST00000453416 441 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 DEFB109A-201ENST00000482450 265 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AC091544.1-201ENST00000484702 348 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 EIF1P7-201ENST00000487533 337 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 RN7SL629P-201ENST00000489622 285 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 RPS4XP14-201ENST00000493072 781 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 BX510359.5-201ENST00000515651 304 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 RN7SKP5-201ENST00000517045 272 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AGGF1P7-201ENST00000562369 913 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 MRPS21P7-201ENST00000566937 238 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AL359513.1-201ENST00000614364 557 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 AC073869.7-201ENST00000640874 297 ntBASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
H3F3CQ6NXT2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
H3F3CQ6NXT2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
H3F3CQ6NXT2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.21□□□□□ -1.57
H3F3CQ6NXT2 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.21□□□□□ -1.57
H3F3CQ6NXT2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
H3F3CQ6NXT2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
H3F3CQ6NXT2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.57
H3F3CQ6NXT2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 Z83820.1-201ENST00000456978 1499 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 RN7SKP279-201ENST00000411383 298 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 FTLP19-201ENST00000433300 394 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 RPS3AP38-201ENST00000435889 763 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC006335.2-201ENST00000437993 330 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC019185.1-201ENST00000442718 389 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 CYCSP51-201ENST00000443545 318 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AP000547.1-201ENST00000454360 617 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC011225.1-201ENST00000457751 369 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AL133445.1-201ENST00000467051 452 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 RPL35AP19-201ENST00000469425 329 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 RN7SL583P-201ENST00000475692 287 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC074386.1-201ENST00000476560 767 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 DUTP1-201ENST00000493631 470 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 OR2A3P-201ENST00000493774 953 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC027026.1-201ENST00000532323 742 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 NPM1P42-201ENST00000560329 862 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 MIR4311-201ENST00000580794 100 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 PPATP2-201ENST00000605635 508 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AL022394.1-201ENST00000606979 292 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AC132068.1-201ENST00000623805 459 ntBASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3CQ6NXT2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms