Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 RNA5SP428-201ENST00000365129 132 ntBASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 AL121977.1-201ENST00000401636 979 ntBASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 AC004690.1-201ENST00000418216 328 ntBASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 RN7SL423P-201ENST00000486202 304 ntBASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 RPS17P5-201ENST00000498293 408 ntBASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 RN7SL356P-201ENST00000582228 248 ntBASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
SNAPC4Q5SXM2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 AC058823.1-201ENST00000485315 474 ntBASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 AC140172.1-201ENST00000502928 141 ntBASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC8.74□□□□□ -1.01
SNAPC4Q5SXM2 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 AL121886.1-201ENST00000358609 435 ntBASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 AL365220.1-201ENST00000432923 399 ntBASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 AC109464.1-201ENST00000511091 819 ntBASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 RN7SKP21-201ENST00000516503 220 ntBASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 GTF2IP11-201ENST00000526931 420 ntBASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 AC018558.5-201ENST00000565840 952 ntBASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 MIR4284-201ENST00000578924 81 ntBASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 MIR1254-2-201ENST00000579553 63 ntBASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 AC006600.2-201ENST00000624834 2506 ntBASIC8.73□□□□□ -1.01
SNAPC4Q5SXM2 AL132640.2-201ENST00000559968 1698 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 AC096921.1-201ENST00000411661 375 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 AC068287.1-201ENST00000430283 295 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 KNOP1P3-201ENST00000446933 426 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 ATP5LP5-201ENST00000483050 299 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 FTH1P8-201ENST00000498161 514 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 AC093720.1-201ENST00000505681 714 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 OR5AM1P-201ENST00000532136 1032 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 AC007114.2-201ENST00000576014 4281 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 AC114774.1-201ENST00000507410 1770 ntBASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SNAPC4Q5SXM2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms