Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AL022319.1-201ENST00000458183 1167 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 RN7SL643P-201ENST00000471845 291 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC022206.1-201ENST00000495947 347 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC098862.1-201ENST00000504991 413 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC079905.1-201ENST00000549280 475 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 SS18L2P2-201ENST00000583960 235 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AL445435.1-201ENST00000604232 665 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AL352984.2-202ENST00000613699 155 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC024884.1-201ENST00000620583 399 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC145207.9-201ENST00000623802 325 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AL078595.3-201ENST00000623815 1166 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 OR7E91P-202ENST00000642062 1198 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AL354854.1-201ENST00000455940 1363 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC119674.1-213ENST00000641177 1386 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 LYPLA1P3-201ENST00000402650 695 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 RPS27AP11-201ENST00000402798 447 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AL136131.1-201ENST00000406079 803 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AL035246.1-201ENST00000433554 1255 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC000041.1-201ENST00000439655 175 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 PPIAP27-201ENST00000453800 265 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 RPL7P45-201ENST00000455851 743 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 SETP20-201ENST00000457046 852 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 RN7SL369P-201ENST00000477138 299 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 RPL7P51-201ENST00000490532 749 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 KHDC1P1-201ENST00000511053 508 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC091163.3-201ENST00000518269 1144 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 MORF4L1P3-201ENST00000525966 950 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AP001804.1-201ENST00000526868 919 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 OR11H3P-201ENST00000554547 982 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 MIR4789-201ENST00000577469 82 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 MIR3614-201ENST00000581261 86 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AL356274.1-201ENST00000617064 410 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms