Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 OR4K17-201ENST00000315543 1032 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRKDCP78527 AC096921.1-201ENST00000411661 375 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.72□□□□□ -1.81
PRKDCP78527 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKDCP78527 AC024451.1-201ENST00000508013 779 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.72□□□□□ -1.81
PRKDCP78527 BNIP3P19-201ENST00000605397 577 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 AC073869.8-201ENST00000641806 335 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
PRKDCP78527 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRKDCP78527 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PRKDCP78527 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKDCP78527 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PRKDCP78527 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKDCP78527 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC3.72□□□□□ -1.81
PRKDCP78527 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRKDCP78527 NSF-206ENST00000575068 2667 ntTSL 2 BASIC3.72□□□□□ -1.81
PRKDCP78527 AP002530.1-201ENST00000405705 684 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 RPS29P9-201ENST00000440360 171 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 AL022319.1-201ENST00000458183 1167 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PRKDCP78527 RPS17P5-201ENST00000498293 408 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3.72□□□□□ -1.81
PRKDCP78527 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC3.72□□□□□ -1.81
PRKDCP78527 RN7SL339P-201ENST00000580597 296 ntBASIC3.72□□□□□ -1.81
PRKDCP78527 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRKDCP78527 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRKDCP78527 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PRKDCP78527 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
PRKDCP78527 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
PRKDCP78527 CASC15-203ENST00000605917 4461 ntBASIC3.71□□□□□ -1.81
PRKDCP78527 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
PRKDCP78527 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
PRKDCP78527 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
PRKDCP78527 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PRKDCP78527 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PRKDCP78527 RNA5SP428-201ENST00000365129 132 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PRKDCP78527 AF186996.5-201ENST00000418098 904 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 RPS29P10-201ENST00000439197 166 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKDCP78527 MTND2P28-201ENST00000457540 1044 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKDCP78527 SAMMSON-210ENST00000641260 1308 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PRKDCP78527 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKDCP78527 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.71□□□□□ -1.82
PRKDCP78527 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 RNU6-525P-201ENST00000363685 104 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 RN7SKP114-201ENST00000410327 279 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKDCP78527 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC3.71□□□□□ -1.82
PRKDCP78527 AC020910.3-201ENST00000603701 874 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AC039056.2-201ENST00000622261 511 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AC004777.1-201ENST00000624317 287 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 UBA3-213ENST00000631029 123 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKDCP78527 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKDCP78527 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKDCP78527 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PRKDCP78527 SNORA63.1-201ENST00000362493 131 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKDCP78527 YME1L1P1-201ENST00000429435 297 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 RPL23AP93-201ENST00000440847 484 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AL162739.1-201ENST00000450606 307 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.71□□□□□ -1.82
PRKDCP78527 CYCSP34-201ENST00000458172 304 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AC073073.1-201ENST00000493920 463 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.71□□□□□ -1.82
PRKDCP78527 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.71□□□□□ -1.82
PRKDCP78527 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.71□□□□□ -1.82
PRKDCP78527 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
PRKDCP78527 BRD7P6-201ENST00000431406 1860 ntBASIC3.71□□□□□ -1.82
PRKDCP78527 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC3.71□□□□□ -1.82
PRKDCP78527 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
PRKDCP78527 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
PRKDCP78527 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRKDCP78527 AC008171.1-201ENST00000395058 200 ntBASIC3.7□□□□□ -1.82
PRKDCP78527 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKDCP78527 AL133372.1-201ENST00000493565 745 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms