Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CL1P78423 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CL1P78423 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 RBMY1HP-201ENST00000382759 1389 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 PROS2P-201ENST00000474651 1951 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC016745.2-201ENST00000608834 3443 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 OR10R3P-201ENST00000361688 942 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 RNU4-7P-201ENST00000364758 141 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CX3CL1P78423 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 VTI1BP4-201ENST00000427516 527 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 BX119904.1-201ENST00000432026 348 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 HMGB3P10-201ENST00000434734 572 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 FTLP8-201ENST00000446770 267 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 AC016027.4-201ENST00000450866 277 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 HSD3BP3-201ENST00000514706 994 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 IGHV3-63-201ENST00000518422 341 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CX3CL1P78423 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AL845552.1-201ENST00000556820 323 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 AC092332.1-201ENST00000563684 829 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 BNIP3P39-201ENST00000601077 554 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 AC084373.1-201ENST00000603311 235 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC009779.8-202ENST00000607990 932 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.8□□□□□ -1.64
CX3CL1P78423 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 AP001052.1-201ENST00000626421 99 ntBASIC4.8□□□□□ -1.64
CX3CL1P78423 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CX3CL1P78423 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CX3CL1P78423 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CX3CL1P78423 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.79□□□□□ -1.64
CX3CL1P78423 AL442128.2-201ENST00000620246 1824 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CX3CL1P78423 ZNF90P1-201ENST00000480493 1951 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CX3CL1P78423 OR4K17-201ENST00000315543 1032 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CX3CL1P78423 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CX3CL1P78423 MIR137-201ENST00000385223 102 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 SNORA77.2-201ENST00000408571 112 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 RN7SKP166-201ENST00000410812 305 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AC245096.1-201ENST00000413104 546 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 AL158827.1-201ENST00000416300 391 ntBASIC4.79□□□□□ -1.64
CX3CL1P78423 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms