Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GTF3AP5-201ENST00000442645 697 ntBASIC3.74□□□□□ -1.81
RPL39P62891 AL157385.1-201ENST00000446973 268 ntBASIC3.74□□□□□ -1.81
RPL39P62891 AC073909.1-201ENST00000447112 999 ntBASIC3.74□□□□□ -1.81
RPL39P62891 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC3.74□□□□□ -1.81
RPL39P62891 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.74□□□□□ -1.81
RPL39P62891 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPL39P62891 VDAC2P4-201ENST00000452925 711 ntBASIC3.74□□□□□ -1.81
RPL39P62891 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC3.74□□□□□ -1.81
RPL39P62891 RPS23P6-201ENST00000466136 431 ntBASIC3.74□□□□□ -1.81
RPL39P62891 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC3.74□□□□□ -1.81
RPL39P62891 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC3.74□□□□□ -1.81
RPL39P62891 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.74□□□□□ -1.81
RPL39P62891 RN7SL814P-201ENST00000487715 300 ntBASIC3.74□□□□□ -1.81
RPL39P62891 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
RPL39P62891 NENFP3-201ENST00000503735 313 ntBASIC3.74□□□□□ -1.81
RPL39P62891 MTND6P2-201ENST00000512226 524 ntBASIC3.74□□□□□ -1.81
RPL39P62891 FTH1P11-201ENST00000517577 551 ntBASIC3.74□□□□□ -1.81
RPL39P62891 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC3.74□□□□□ -1.81
RPL39P62891 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC3.74□□□□□ -1.81
RPL39P62891 AC116917.1-201ENST00000520558 305 ntBASIC3.74□□□□□ -1.81
RPL39P62891 AC022360.1-201ENST00000521058 340 ntBASIC3.74□□□□□ -1.81
RPL39P62891 MRPS16P1-201ENST00000523462 412 ntBASIC3.74□□□□□ -1.81
RPL39P62891 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC3.74□□□□□ -1.81
RPL39P62891 HMGB1P42-201ENST00000532126 553 ntBASIC3.74□□□□□ -1.81
RPL39P62891 MED21-206ENST00000546323 575 ntTSL 3 BASIC3.74□□□□□ -1.81
RPL39P62891 AC068993.1-201ENST00000546724 589 ntBASIC3.74□□□□□ -1.81
RPL39P62891 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RPL39P62891 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC3.74□□□□□ -1.81
RPL39P62891 DPPA2P4-201ENST00000563717 878 ntBASIC3.74□□□□□ -1.81
RPL39P62891 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.74□□□□□ -1.81
RPL39P62891 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC3.74□□□□□ -1.81
RPL39P62891 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.74□□□□□ -1.81
RPL39P62891 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RPL39P62891 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
RPL39P62891 AP000648.2-201ENST00000624182 404 ntBASIC3.74□□□□□ -1.81
RPL39P62891 AC129915.3-201ENST00000634128 948 ntBASIC3.74□□□□□ -1.81
RPL39P62891 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.74□□□□□ -1.81
RPL39P62891 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.74□□□□□ -1.81
RPL39P62891 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RPL39P62891 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPL39P62891 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC3.74□□□□□ -1.81
RPL39P62891 NEPNP-201ENST00000404786 1371 ntBASIC3.74□□□□□ -1.81
RPL39P62891 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RPL39P62891 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
RPL39P62891 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RPL39P62891 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.74□□□□□ -1.81
RPL39P62891 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
RPL39P62891 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RPL39P62891 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 TET1P1-201ENST00000426627 2301 ntBASIC3.73□□□□□ -1.81
RPL39P62891 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RPL39P62891 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RPL39P62891 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 SRRM1P3-201ENST00000426911 2678 ntBASIC3.73□□□□□ -1.81
RPL39P62891 AC026523.2-201ENST00000625039 7739 ntBASIC3.73□□□□□ -1.81
RPL39P62891 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC3.73□□□□□ -1.81
RPL39P62891 RNA5SP273-201ENST00000362484 113 ntBASIC3.73□□□□□ -1.81
RPL39P62891 RN7SKP6-201ENST00000364795 319 ntBASIC3.73□□□□□ -1.81
RPL39P62891 RNA5SP223-201ENST00000365174 120 ntBASIC3.73□□□□□ -1.81
RPL39P62891 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 RPS3AP2-201ENST00000407190 754 ntBASIC3.73□□□□□ -1.81
RPL39P62891 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC3.73□□□□□ -1.81
RPL39P62891 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.73□□□□□ -1.81
RPL39P62891 OR6D1P-201ENST00000436165 939 ntBASIC3.73□□□□□ -1.81
RPL39P62891 RPL12P18-201ENST00000437175 325 ntBASIC3.73□□□□□ -1.81
RPL39P62891 AC064862.5-201ENST00000440618 334 ntBASIC3.73□□□□□ -1.81
RPL39P62891 NOP56P2-201ENST00000447491 769 ntBASIC3.73□□□□□ -1.81
RPL39P62891 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.73□□□□□ -1.81
RPL39P62891 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 TPT1P1-201ENST00000458495 518 ntBASIC3.73□□□□□ -1.81
RPL39P62891 AC108161.1-201ENST00000461060 402 ntBASIC3.73□□□□□ -1.81
RPL39P62891 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC3.73□□□□□ -1.81
RPL39P62891 SNRPCP11-201ENST00000492453 205 ntBASIC3.73□□□□□ -1.81
RPL39P62891 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC3.73□□□□□ -1.81
RPL39P62891 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC3.73□□□□□ -1.81
RPL39P62891 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.73□□□□□ -1.81
RPL39P62891 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC3.73□□□□□ -1.81
RPL39P62891 RNU6-513P-201ENST00000516104 104 ntBASIC3.73□□□□□ -1.81
RPL39P62891 Y_RNA.667-201ENST00000516212 107 ntBASIC3.73□□□□□ -1.81
RPL39P62891 RNA5SP438-201ENST00000516561 112 ntBASIC3.73□□□□□ -1.81
RPL39P62891 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC3.73□□□□□ -1.81
RPL39P62891 DCN-210ENST00000547568 823 ntTSL 3 BASIC3.73□□□□□ -1.81
RPL39P62891 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC3.73□□□□□ -1.81
RPL39P62891 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC3.73□□□□□ -1.81
RPL39P62891 RN7SL356P-201ENST00000582228 248 ntBASIC3.73□□□□□ -1.81
RPL39P62891 MIR3936-201ENST00000584304 110 ntBASIC3.73□□□□□ -1.81
RPL39P62891 AC015802.2-201ENST00000589690 189 ntBASIC3.73□□□□□ -1.81
RPL39P62891 AL512413.1-201ENST00000606489 382 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms