Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RPL41P2-201ENST00000544920 409 ntBASIC3.96□□□□□ -1.78
CKS1BP61024 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC3.96□□□□□ -1.78
CKS1BP61024 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC3.96□□□□□ -1.78
CKS1BP61024 NMNAT1P5-201ENST00000559657 841 ntBASIC3.96□□□□□ -1.78
CKS1BP61024 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS1BP61024 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CKS1BP61024 OR1F2P-201ENST00000570470 933 ntBASIC3.96□□□□□ -1.78
CKS1BP61024 AC025283.1-201ENST00000572039 734 ntBASIC3.96□□□□□ -1.78
CKS1BP61024 AC027796.1-201ENST00000575593 512 ntBASIC3.96□□□□□ -1.78
CKS1BP61024 RN7SL657P-201ENST00000582431 293 ntBASIC3.96□□□□□ -1.78
CKS1BP61024 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS1BP61024 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC3.96□□□□□ -1.78
CKS1BP61024 AL645933.2-201ENST00000606743 1207 ntBASIC3.96□□□□□ -1.78
CKS1BP61024 AL591167.1-201ENST00000607321 456 ntBASIC3.96□□□□□ -1.78
CKS1BP61024 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CKS1BP61024 MIR6829-201ENST00000620375 67 ntBASIC3.96□□□□□ -1.78
CKS1BP61024 TEX41-293ENST00000630451 690 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS1BP61024 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS1BP61024 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CKS1BP61024 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CKS1BP61024 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CKS1BP61024 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CKS1BP61024 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.96□□□□□ -1.78
CKS1BP61024 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CKS1BP61024 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC3.96□□□□□ -1.78
CKS1BP61024 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CKS1BP61024 MAPK10-304ENST00000641341 3984 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CKS1BP61024 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CKS1BP61024 HSPD1P16-201ENST00000402302 394 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 PRELID1P1-201ENST00000403549 660 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 NANOGP4-201ENST00000427230 913 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.95□□□□□ -1.78
CKS1BP61024 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CKS1BP61024 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS1BP61024 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 SEPT14P12-201ENST00000442280 560 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AL162388.1-201ENST00000450912 352 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS1BP61024 APOOP2-201ENST00000461561 539 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 RPSAP39-201ENST00000467439 883 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 RPL23AP37-201ENST00000479658 549 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CKS1BP61024 RPL34P33-201ENST00000486062 334 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 PPM1AP1-201ENST00000502740 1135 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS1BP61024 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS1BP61024 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC3.95□□□□□ -1.78
CKS1BP61024 RN7SKP64-201ENST00000517206 328 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC3.95□□□□□ -1.78
CKS1BP61024 BICD1-206ENST00000551086 423 ntTSL 3 BASIC3.95□□□□□ -1.78
CKS1BP61024 RN7SL176P-201ENST00000580352 264 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AC024267.2-201ENST00000582737 417 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC3.95□□□□□ -1.78
CKS1BP61024 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 AL353729.2-201ENST00000605859 1249 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 OR7M1P-201ENST00000608946 533 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 OSTC-205ENST00000613215 876 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 MIR6736-201ENST00000616799 59 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 AC067931.1-201ENST00000624190 671 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 AC007382.1-201ENST00000624376 2618 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
CKS1BP61024 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 AC027279.1-201ENST00000568885 4284 ntBASIC3.95□□□□□ -1.78
CKS1BP61024 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.95□□□□□ -1.78
CKS1BP61024 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CKS1BP61024 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms