Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 RNA5SP27-201ENST00000363839 119 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 BMS1P3-201ENST00000372011 932 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AL034403.1-201ENST00000399414 885 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AL590084.1-201ENST00000407885 387 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 CBX1P3-201ENST00000413296 527 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 HMGB3P31-201ENST00000413333 595 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 PTP4A1P5-201ENST00000420305 455 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 FO393419.3-201ENST00000428741 282 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 AL645939.3-201ENST00000435408 225 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 MTCO2P7-201ENST00000446518 666 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AL050341.1-201ENST00000447743 313 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 NPM1P19-201ENST00000450070 712 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 AL034369.1-201ENST00000453808 477 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 NECAP1P2-201ENST00000455668 727 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 SNX18P26-201ENST00000458433 740 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.73□□□□□ -1.49
CLRN1P58418 RN7SL413P-201ENST00000482700 297 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 OR5BM1P-201ENST00000512021 366 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.73□□□□□ -1.49
CLRN1P58418 RNU6-1308P-201ENST00000516817 103 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 RPL3P13-201ENST00000550415 216 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AL049870.4-201ENST00000555741 486 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AC026956.1-201ENST00000558741 396 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AC023968.1-201ENST00000560719 475 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 FAM106CP-201ENST00000582212 507 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 AP001269.3-201ENST00000588718 329 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.73□□□□□ -1.49
CLRN1P58418 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC004805.3-201ENST00000603178 310 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AL390877.1-201ENST00000605704 214 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AC080013.3-201ENST00000606839 578 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AP003392.5-201ENST00000607857 415 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC008121.2-201ENST00000614647 523 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AP004607.9-201ENST00000618202 316 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AC026124.2-201ENST00000621847 656 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 MIR6503-201ENST00000622884 86 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 OR1S1-201ENST00000624470 978 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLRN1P58418 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 FANCD2P2-201ENST00000437591 1400 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 AC005702.3-201ENST00000585345 1447 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 AC117409.1-201ENST00000470499 1310 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CLRN1P58418 CUBNP3-201ENST00000457461 1784 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 AC011369.2-201ENST00000624423 1567 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.72□□□□□ -1.49
CLRN1P58418 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLRN1P58418 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLRN1P58418 MTND4P5-201ENST00000435821 1374 ntBASIC5.72□□□□□ -1.49
CLRN1P58418 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms