Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH12P55289 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
CDH12P55289 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
CDH12P55289 AC109446.4-201ENST00000623235 2755 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AP004607.3-201ENST00000530354 3915 ntBASIC5.41□□□□□ -1.54
CDH12P55289 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 GNL2P1-201ENST00000451274 2190 ntBASIC5.41□□□□□ -1.54
CDH12P55289 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 RN7SKP184-201ENST00000362348 333 ntBASIC5.41□□□□□ -1.54
CDH12P55289 RN7SKP78-201ENST00000364711 318 ntBASIC5.41□□□□□ -1.54
CDH12P55289 RN7SKP186-201ENST00000365371 303 ntBASIC5.41□□□□□ -1.54
CDH12P55289 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 RNA5SP91-201ENST00000390902 119 ntBASIC5.41□□□□□ -1.54
CDH12P55289 Z86062.1-201ENST00000406773 777 ntBASIC5.41□□□□□ -1.54
CDH12P55289 RN7SKP279-201ENST00000411383 298 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH12P55289 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH12P55289 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH12P55289 AL606490.7-201ENST00000433136 191 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AL512661.1-201ENST00000434586 1253 ntBASIC5.41□□□□□ -1.54
CDH12P55289 RPS12P17-201ENST00000438591 377 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH12P55289 AL606517.1-201ENST00000446914 387 ntBASIC5.41□□□□□ -1.54
CDH12P55289 RNU1-88P-201ENST00000459274 128 ntBASIC5.41□□□□□ -1.54
CDH12P55289 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
CDH12P55289 OR7E157P-201ENST00000494376 911 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC015864.1-201ENST00000496512 544 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC008629.2-201ENST00000503783 483 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC112484.3-201ENST00000505910 329 ntBASIC5.41□□□□□ -1.54
CDH12P55289 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH12P55289 GLUD1P3-202ENST00000508551 200 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC093770.1-201ENST00000511559 571 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH12P55289 AC016550.3-201ENST00000515706 767 ntBASIC5.41□□□□□ -1.54
CDH12P55289 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH12P55289 AP001372.4-201ENST00000524889 472 ntBASIC5.41□□□□□ -1.54
CDH12P55289 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH12P55289 C1DP5-201ENST00000525775 383 ntBASIC5.41□□□□□ -1.54
CDH12P55289 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH12P55289 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDH12P55289 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH12P55289 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH12P55289 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH12P55289 NOP56P3-201ENST00000549457 385 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH12P55289 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH12P55289 CD24P2-201ENST00000565486 219 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH12P55289 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 AC005242.1-201ENST00000585658 438 ntBASIC5.41□□□□□ -1.54
CDH12P55289 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH12P55289 AC011500.1-201ENST00000601963 469 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC005828.7-201ENST00000607331 556 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC015712.7-201ENST00000615211 635 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC018926.1-201ENST00000616335 435 ntBASIC5.41□□□□□ -1.54
CDH12P55289 MIR1264-201ENST00000616374 69 ntBASIC5.41□□□□□ -1.54
CDH12P55289 RNA5SP439-201ENST00000617595 124 ntBASIC5.41□□□□□ -1.54
CDH12P55289 FAM27E2-201ENST00000619668 403 ntBASIC5.41□□□□□ -1.54
CDH12P55289 MIR6813-201ENST00000621638 56 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC005618.4-201ENST00000625053 554 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC073488.3-201ENST00000631611 778 ntBASIC5.41□□□□□ -1.54
CDH12P55289 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH12P55289 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
CDH12P55289 AC017002.4-201ENST00000604721 1525 ntBASIC5.41□□□□□ -1.54
CDH12P55289 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH12P55289 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH12P55289 MFSD8-239ENST00000641590 2479 ntBASIC5.4□□□□□ -1.54
CDH12P55289 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDH12P55289 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH12P55289 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH12P55289 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH12P55289 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
CDH12P55289 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH12P55289 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH12P55289 RN7SKP250-201ENST00000363924 321 ntBASIC5.4□□□□□ -1.54
CDH12P55289 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDH12P55289 RANP4-201ENST00000413361 655 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 THEM7P-201ENST00000419556 672 ntBASIC5.4□□□□□ -1.54
CDH12P55289 FAM183DP-201ENST00000421987 399 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 SETP9-201ENST00000423837 832 ntBASIC5.4□□□□□ -1.54
CDH12P55289 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.4□□□□□ -1.54
CDH12P55289 RPSAP65-201ENST00000429660 595 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 MTND2P40-201ENST00000436718 841 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 AL353662.1-201ENST00000439099 327 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms