Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.61□□□□□ -1.35
TM4SF4P48230 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TM4SF4P48230 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
TM4SF4P48230 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 RNA5SP335-201ENST00000363817 110 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 RNA5SP30-201ENST00000365552 115 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.6□□□□□ -1.35
TM4SF4P48230 NIFKP3-201ENST00000417799 865 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 AC108075.1-201ENST00000424692 529 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 LDHAP2-201ENST00000437325 985 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 AC010468.3-201ENST00000508225 458 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.6□□□□□ -1.35
TM4SF4P48230 RN7SKP34-201ENST00000516142 244 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.6□□□□□ -1.35
TM4SF4P48230 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 AC126615.2-201ENST00000553003 515 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.6□□□□□ -1.35
TM4SF4P48230 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.6□□□□□ -1.35
TM4SF4P48230 MIR4697-201ENST00000582977 78 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.6□□□□□ -1.35
TM4SF4P48230 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.6□□□□□ -1.35
TM4SF4P48230 AC012616.1-201ENST00000600294 197 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 FAM25E-202ENST00000608562 189 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 AL356608.1-201ENST00000610034 820 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 AL445493.3-201ENST00000619568 477 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.6□□□□□ -1.35
TM4SF4P48230 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
TM4SF4P48230 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TM4SF4P48230 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.6□□□□□ -1.35
TM4SF4P48230 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TM4SF4P48230 AC107980.1-201ENST00000558671 3355 ntBASIC6.6□□□□□ -1.35
TM4SF4P48230 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TM4SF4P48230 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.59□□□□□ -1.35
TM4SF4P48230 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TM4SF4P48230 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TM4SF4P48230 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TM4SF4P48230 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TM4SF4P48230 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TM4SF4P48230 THAP12P9-201ENST00000503971 2360 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TM4SF4P48230 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
TM4SF4P48230 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.59□□□□□ -1.35
TM4SF4P48230 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TM4SF4P48230 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC006213.6-201ENST00000623722 4179 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TM4SF4P48230 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC016397.1-201ENST00000412463 242 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 AC093162.1-201ENST00000419682 124 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 PRUNEP1-201ENST00000425846 705 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 PTP4A1P3-201ENST00000433661 420 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.59□□□□□ -1.35
TM4SF4P48230 ACA64.4-201ENST00000459070 127 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.59□□□□□ -1.35
TM4SF4P48230 RN7SL346P-201ENST00000491561 294 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 HMGB1P3-201ENST00000502802 616 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 RPEP1-201ENST00000504507 658 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 AC016550.1-201ENST00000505348 785 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.59□□□□□ -1.35
TM4SF4P48230 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC110775.1-201ENST00000513721 462 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
TM4SF4P48230 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC092451.2-201ENST00000538746 658 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 HMGN2P47-201ENST00000559378 272 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 PRELID3BP3-201ENST00000584963 545 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AF230666.2-201ENST00000602328 725 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 BNIP3P19-201ENST00000605397 577 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 AC091953.3-201ENST00000623220 236 ntBASIC6.59□□□□□ -1.35
TM4SF4P48230 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.59□□□□□ -1.35
TM4SF4P48230 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms