Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPA3P35244 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.51□□□□□ -1.53
RPA3P35244 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.51□□□□□ -1.53
RPA3P35244 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.51□□□□□ -1.53
RPA3P35244 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 AC139426.3-201ENST00000605648 2059 ntBASIC5.51□□□□□ -1.53
RPA3P35244 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.51□□□□□ -1.53
RPA3P35244 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RPA3P35244 AC003985.2-201ENST00000562268 1669 ntBASIC5.51□□□□□ -1.53
RPA3P35244 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.51□□□□□ -1.53
RPA3P35244 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 SNORA64.1-201ENST00000362600 132 ntBASIC5.51□□□□□ -1.53
RPA3P35244 OR1L6-202ENST00000373684 1044 ntBASIC5.51□□□□□ -1.53
RPA3P35244 AL009179.1-201ENST00000406085 265 ntBASIC5.51□□□□□ -1.53
RPA3P35244 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.51□□□□□ -1.53
RPA3P35244 OR2AT2P-201ENST00000413438 905 ntBASIC5.51□□□□□ -1.53
RPA3P35244 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.51□□□□□ -1.53
RPA3P35244 HSPD1P12-201ENST00000429127 1069 ntBASIC5.51□□□□□ -1.53
RPA3P35244 AC079807.1-201ENST00000429993 481 ntBASIC5.51□□□□□ -1.53
RPA3P35244 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.51□□□□□ -1.53
RPA3P35244 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.51□□□□□ -1.53
RPA3P35244 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.51□□□□□ -1.53
RPA3P35244 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.51□□□□□ -1.53
RPA3P35244 AC007998.1-201ENST00000474156 672 ntBASIC5.51□□□□□ -1.53
RPA3P35244 ENPP7P11-201ENST00000505915 627 ntBASIC5.51□□□□□ -1.53
RPA3P35244 HMGN1P9-201ENST00000515212 298 ntBASIC5.51□□□□□ -1.53
RPA3P35244 SCARNA20.4-201ENST00000516969 131 ntBASIC5.51□□□□□ -1.53
RPA3P35244 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.51□□□□□ -1.53
RPA3P35244 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.51□□□□□ -1.53
RPA3P35244 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.51□□□□□ -1.53
RPA3P35244 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.51□□□□□ -1.53
RPA3P35244 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.51□□□□□ -1.53
RPA3P35244 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.51□□□□□ -1.53
RPA3P35244 MTCYBP13-201ENST00000578634 1093 ntBASIC5.51□□□□□ -1.53
RPA3P35244 H3F3BP2-201ENST00000583907 357 ntBASIC5.51□□□□□ -1.53
RPA3P35244 FAM72A-208ENST00000607379 1139 ntBASIC5.51□□□□□ -1.53
RPA3P35244 AC138965.3-201ENST00000623875 498 ntBASIC5.51□□□□□ -1.53
RPA3P35244 MIR193BHG-214ENST00000641765 509 ntBASIC5.51□□□□□ -1.53
RPA3P35244 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 AC007842.1-201ENST00000597336 2039 ntBASIC5.51□□□□□ -1.53
RPA3P35244 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
RPA3P35244 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.51□□□□□ -1.53
RPA3P35244 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.51□□□□□ -1.53
RPA3P35244 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPA3P35244 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.5□□□□□ -1.53
RPA3P35244 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RPA3P35244 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RPA3P35244 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 RNA5SP394-201ENST00000364216 119 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 RPL34P3-201ENST00000421454 338 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC007161.1-204ENST00000423039 460 ntBASIC5.5□□□□□ -1.53
RPA3P35244 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RPA3P35244 RPL19P16-201ENST00000433839 588 ntBASIC5.5□□□□□ -1.53
RPA3P35244 RPL23AP19-201ENST00000436229 369 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.5□□□□□ -1.53
RPA3P35244 TCEA1P3-201ENST00000443005 880 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC016772.1-201ENST00000444170 1261 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC073109.1-201ENST00000445066 978 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 GAPDHP14-201ENST00000450472 937 ntBASIC5.5□□□□□ -1.53
RPA3P35244 LRRC37A14P-201ENST00000452297 462 ntBASIC5.5□□□□□ -1.53
RPA3P35244 RPS23P6-201ENST00000466136 431 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC087672.1-201ENST00000479876 766 ntBASIC5.5□□□□□ -1.53
RPA3P35244 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.5□□□□□ -1.53
RPA3P35244 AL049874.2-201ENST00000492636 288 ntBASIC5.5□□□□□ -1.53
RPA3P35244 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.5□□□□□ -1.53
RPA3P35244 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 RNU6-615P-201ENST00000516065 106 ntBASIC5.5□□□□□ -1.53
RPA3P35244 CDC42P3-201ENST00000518493 633 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC022826.1-201ENST00000519383 805 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC027369.5-201ENST00000533838 755 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.5□□□□□ -1.53
RPA3P35244 AC040958.1-201ENST00000561102 201 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC093524.1-201ENST00000564266 1094 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.5□□□□□ -1.53
RPA3P35244 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.5□□□□□ -1.53
RPA3P35244 AC063977.5-201ENST00000601044 974 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC027243.2-201ENST00000602530 724 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AC005899.7-201ENST00000618199 588 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms