Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXA9P31269 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
HOXA9P31269 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
HOXA9P31269 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HOXA9P31269 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXA9P31269 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXA9P31269 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HOXA9P31269 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXA9P31269 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXA9P31269 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXA9P31269 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
HOXA9P31269 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA9P31269 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA9P31269 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXA9P31269 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA9P31269 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HOXA9P31269 U3.2-201ENST00000362981 210 ntBASIC5.81□□□□□ -1.48
HOXA9P31269 SNORA67-201ENST00000384423 137 ntBASIC5.81□□□□□ -1.48
HOXA9P31269 RPL11P3-201ENST00000395256 523 ntBASIC5.81□□□□□ -1.48
HOXA9P31269 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.81□□□□□ -1.48
HOXA9P31269 AC117434.1-201ENST00000419971 836 ntBASIC5.81□□□□□ -1.48
HOXA9P31269 RNGTTP1-201ENST00000420965 728 ntBASIC5.81□□□□□ -1.48
HOXA9P31269 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.81□□□□□ -1.48
HOXA9P31269 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA9P31269 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA9P31269 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXA9P31269 PMS2P3-207ENST00000529061 717 ntBASIC5.81□□□□□ -1.48
HOXA9P31269 RN7SL708P-201ENST00000580952 299 ntBASIC5.81□□□□□ -1.48
HOXA9P31269 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA9P31269 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA9P31269 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA9P31269 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA9P31269 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA9P31269 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA9P31269 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA9P31269 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
HOXA9P31269 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA9P31269 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXA9P31269 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA9P31269 MT-RNR2-201ENST00000387347 1559 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
HOXA9P31269 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA9P31269 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXA9P31269 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA9P31269 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA9P31269 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA9P31269 MSL3P1-202ENST00000440028 1468 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXA9P31269 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HOXA9P31269 AL121977.1-201ENST00000401636 979 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 RN7SKP279-201ENST00000411383 298 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXA9P31269 AC007161.1-204ENST00000423039 460 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXA9P31269 FAM96AP1-201ENST00000430879 482 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 AC073410.1-201ENST00000435125 589 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 CEACAMP7-201ENST00000444105 496 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 RSU1P1-201ENST00000453416 441 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 AL645937.3-201ENST00000453647 936 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXA9P31269 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXA9P31269 HMGB1P44-201ENST00000508597 572 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 HMGB1P40-201ENST00000525121 540 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXA9P31269 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXA9P31269 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXA9P31269 AP000619.2-201ENST00000546014 969 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXA9P31269 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HOXA9P31269 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXA9P31269 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXA9P31269 AL513327.3-201ENST00000602618 469 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 LSM1P2-201ENST00000604911 322 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 HIRAP1-201ENST00000605318 787 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 AC074101.1-201ENST00000637861 241 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HOXA9P31269 AC083837.1-201ENST00000565297 2994 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 AL591135.1-201ENST00000401578 5914 ntBASIC5.8□□□□□ -1.48
HOXA9P31269 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HOXA9P31269 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HOXA9P31269 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXA9P31269 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA9P31269 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HOXA9P31269 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXA9P31269 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXA9P31269 AC020656.2-201ENST00000613291 5309 ntBASIC5.79□□□□□ -1.48
HOXA9P31269 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA9P31269 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HOXA9P31269 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HOXA9P31269 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
HOXA9P31269 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXA9P31269 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXA9P31269 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXA9P31269 AC093655.2-201ENST00000425735 631 ntBASIC5.79□□□□□ -1.48
HOXA9P31269 VN1R54P-201ENST00000435210 1049 ntBASIC5.79□□□□□ -1.48
HOXA9P31269 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXA9P31269 REG1CP-206ENST00000447469 496 ntBASIC5.79□□□□□ -1.48
HOXA9P31269 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXA9P31269 AL672138.1-201ENST00000450604 1015 ntBASIC5.79□□□□□ -1.48
HOXA9P31269 AL389915.2-201ENST00000454576 441 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms