Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AC012075.1-201ENST00000436549 580 ntBASIC5.32□□□□□ -1.56
MMP11P24347 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.32□□□□□ -1.56
MMP11P24347 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP11P24347 AC026348.1-201ENST00000462549 1053 ntBASIC5.32□□□□□ -1.56
MMP11P24347 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP11P24347 GLUD1P3-202ENST00000508551 200 ntBASIC5.32□□□□□ -1.56
MMP11P24347 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP11P24347 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP11P24347 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.32□□□□□ -1.56
MMP11P24347 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.32□□□□□ -1.56
MMP11P24347 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP11P24347 AC016839.1-201ENST00000578162 867 ntBASIC5.32□□□□□ -1.56
MMP11P24347 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.32□□□□□ -1.56
MMP11P24347 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP11P24347 SUMO2P15-201ENST00000604285 278 ntBASIC5.32□□□□□ -1.56
MMP11P24347 HIRAP1-201ENST00000605318 787 ntBASIC5.32□□□□□ -1.56
MMP11P24347 AL353729.2-201ENST00000605859 1249 ntBASIC5.32□□□□□ -1.56
MMP11P24347 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.32□□□□□ -1.56
MMP11P24347 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.32□□□□□ -1.56
MMP11P24347 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
MMP11P24347 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.32□□□□□ -1.56
MMP11P24347 LINC01963-201ENST00000562038 3148 ntBASIC5.32□□□□□ -1.56
MMP11P24347 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MMP11P24347 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MMP11P24347 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
MMP11P24347 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MMP11P24347 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 RN7SKP185-201ENST00000362813 326 ntBASIC5.31□□□□□ -1.56
MMP11P24347 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MMP11P24347 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.31□□□□□ -1.56
MMP11P24347 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.31□□□□□ -1.56
MMP11P24347 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.31□□□□□ -1.56
MMP11P24347 VN1R21P-201ENST00000426703 765 ntBASIC5.31□□□□□ -1.56
MMP11P24347 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.31□□□□□ -1.56
MMP11P24347 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.31□□□□□ -1.56
MMP11P24347 AL390119.1-201ENST00000440329 312 ntBASIC5.31□□□□□ -1.56
MMP11P24347 AC007386.1-201ENST00000455212 582 ntBASIC5.31□□□□□ -1.56
MMP11P24347 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.31□□□□□ -1.56
MMP11P24347 SNRPCP3-201ENST00000474888 476 ntBASIC5.31□□□□□ -1.56
MMP11P24347 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.31□□□□□ -1.56
MMP11P24347 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.31□□□□□ -1.56
MMP11P24347 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.31□□□□□ -1.56
MMP11P24347 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.31□□□□□ -1.56
MMP11P24347 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.31□□□□□ -1.56
MMP11P24347 AC010245.2-201ENST00000606908 1167 ntBASIC5.31□□□□□ -1.56
MMP11P24347 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 AL035661.1-201ENST00000620459 1144 ntBASIC5.31□□□□□ -1.56
MMP11P24347 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.31□□□□□ -1.56
MMP11P24347 NLRP3P1-201ENST00000622303 1785 ntBASIC5.31□□□□□ -1.56
MMP11P24347 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
MMP11P24347 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
MMP11P24347 AC109446.4-201ENST00000623235 2755 ntBASIC5.31□□□□□ -1.56
MMP11P24347 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
MMP11P24347 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP11P24347 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
MMP11P24347 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP11P24347 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
MMP11P24347 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP11P24347 RNU4-2-201ENST00000365668 141 ntBASIC5.3□□□□□ -1.56
MMP11P24347 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP11P24347 RNU1-136P-201ENST00000384181 164 ntBASIC5.3□□□□□ -1.56
MMP11P24347 MIR130A-201ENST00000385274 89 ntBASIC5.3□□□□□ -1.56
MMP11P24347 RNGTTP1-201ENST00000420965 728 ntBASIC5.3□□□□□ -1.56
MMP11P24347 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.3□□□□□ -1.56
MMP11P24347 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP11P24347 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP11P24347 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP11P24347 CYCSP51-201ENST00000443545 318 ntBASIC5.3□□□□□ -1.56
MMP11P24347 AL163193.1-201ENST00000444895 788 ntBASIC5.3□□□□□ -1.56
MMP11P24347 MYO5BP2-201ENST00000449815 1277 ntBASIC5.3□□□□□ -1.56
MMP11P24347 AL450023.1-201ENST00000450868 751 ntBASIC5.3□□□□□ -1.56
MMP11P24347 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 AC110749.1-201ENST00000462007 357 ntBASIC5.3□□□□□ -1.56
MMP11P24347 RN7SL583P-201ENST00000475692 287 ntBASIC5.3□□□□□ -1.56
MMP11P24347 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP11P24347 AC012123.2-201ENST00000485809 248 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms