Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.43□□□□□ -1.38
COL6A2P12110 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
COL6A2P12110 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL6A2P12110 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 AC023245.2-201ENST00000530760 2978 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 RBPJP6-201ENST00000411556 1431 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.42□□□□□ -1.38
COL6A2P12110 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.42□□□□□ -1.38
COL6A2P12110 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 FAM133CP-201ENST00000332869 704 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 SNORA70.9-201ENST00000384370 135 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 SNORD65C-201ENST00000390962 71 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 EEF1GP6-201ENST00000402309 905 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 ERHP2-201ENST00000402323 299 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 GSTA8P-201ENST00000404253 637 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 AL079341.1-201ENST00000404701 1207 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 UBTFL2-201ENST00000411859 1191 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.42□□□□□ -1.38
COL6A2P12110 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.42□□□□□ -1.38
COL6A2P12110 AL035407.1-201ENST00000429211 571 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 AL035458.1-201ENST00000433096 585 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.42□□□□□ -1.38
COL6A2P12110 GAPDHP33-201ENST00000443168 1013 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 AL592437.1-201ENST00000443781 492 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 AC068135.1-201ENST00000446164 246 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 UOX-201ENST00000471089 899 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL6A2P12110 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.42□□□□□ -1.38
COL6A2P12110 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL6A2P12110 AC111000.2-201ENST00000507775 550 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 IGKV1D-22-201ENST00000518953 324 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.42□□□□□ -1.38
COL6A2P12110 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.42□□□□□ -1.38
COL6A2P12110 AC126323.4-201ENST00000566935 234 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 RN7SL426P-201ENST00000579106 295 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.42□□□□□ -1.38
COL6A2P12110 AP001269.3-201ENST00000588718 329 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.42□□□□□ -1.38
COL6A2P12110 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.42□□□□□ -1.38
COL6A2P12110 AC024255.1-201ENST00000614376 102 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 AC068792.1-201ENST00000621354 417 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 MRPL57P1-201ENST00000621486 265 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 AC015660.5-201ENST00000623238 564 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.42□□□□□ -1.38
COL6A2P12110 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
COL6A2P12110 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.42□□□□□ -1.38
COL6A2P12110 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.42□□□□□ -1.38
COL6A2P12110 HSPD1P1-201ENST00000503199 1726 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL6A2P12110 MTCO1P18-201ENST00000455518 1419 ntBASIC6.42□□□□□ -1.38
COL6A2P12110 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
COL6A2P12110 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.41□□□□□ -1.38
COL6A2P12110 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.41□□□□□ -1.38
COL6A2P12110 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.41□□□□□ -1.38
COL6A2P12110 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL6A2P12110 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL6A2P12110 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL6A2P12110 RNU1-87P-201ENST00000363727 170 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.41□□□□□ -1.38
COL6A2P12110 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.41□□□□□ -1.38
COL6A2P12110 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.41□□□□□ -1.38
COL6A2P12110 DNAJC19P6-201ENST00000401853 280 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 RPL5P20-201ENST00000403848 896 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AL590635.1-201ENST00000406314 586 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AL590084.1-201ENST00000407885 387 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 RNU6-648P-201ENST00000410190 107 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AC024937.2-201ENST00000411669 1242 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.41□□□□□ -1.38
COL6A2P12110 SETP15-201ENST00000412724 337 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.41□□□□□ -1.38
COL6A2P12110 BTF3P8-201ENST00000414577 526 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 CYP4F30P-202ENST00000420048 405 ntBASIC6.41□□□□□ -1.38
COL6A2P12110 NME1P1-201ENST00000420914 382 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms