Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC006600.2-201ENST00000624834 2506 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC007342.7-201ENST00000624610 2337 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 KARSP1-201ENST00000451871 1752 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 SNORA51.1-201ENST00000363243 140 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 RNU6-1283P-201ENST00000365314 105 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 RN7SKP69-201ENST00000365390 305 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 OR13C3-201ENST00000374781 1108 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 Y_RNA.578-201ENST00000390903 88 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 RN7SKP108-201ENST00000411367 328 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC066692.1-201ENST00000421721 457 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 TAF9P1-201ENST00000445421 515 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AL157827.1-201ENST00000447622 132 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 TAF9P2-201ENST00000454958 515 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC131392.1-201ENST00000506490 633 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 RERGL-202ENST00000536890 367 ntTSL 3 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 RBM22P1-201ENST00000578589 1214 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AC008507.3-201ENST00000585753 472 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AP001264.1-201ENST00000620602 703 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AP000577.1-201ENST00000624366 878 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 MTND4P31-201ENST00000425607 1343 ntBASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CSB-PGBD3P0DP91 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 OR5H15-201ENST00000383696 930 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AL136310.1-201ENST00000404926 654 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AL451046.1-201ENST00000406097 534 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 FCF1P5-201ENST00000406490 482 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 RN7SKP206-201ENST00000410823 293 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC092638.1-201ENST00000411966 1275 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 SETP15-201ENST00000412724 337 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AL365203.2-201ENST00000423444 196 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC104843.2-201ENST00000427666 297 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC094019.1-201ENST00000434678 472 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC009961.3-201ENST00000449832 765 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC008565.1-201ENST00000509046 885 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC060788.1-201ENST00000521318 469 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 PTTG3P-201ENST00000521862 606 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC104417.1-201ENST00000523974 751 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms