Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
KDELR3O43731 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KDELR3O43731 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KDELR3O43731 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KDELR3O43731 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
KDELR3O43731 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
KDELR3O43731 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.58□□□□□ -1.52
KDELR3O43731 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.58□□□□□ -1.52
KDELR3O43731 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
KDELR3O43731 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
KDELR3O43731 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KDELR3O43731 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KDELR3O43731 RN7SKP185-201ENST00000362813 326 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 RN7SKP186-201ENST00000365371 303 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 SRSF1P1-201ENST00000424058 520 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 RPL12P17-201ENST00000432393 498 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.57□□□□□ -1.52
KDELR3O43731 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 AC073465.2-201ENST00000440938 498 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.57□□□□□ -1.52
KDELR3O43731 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.57□□□□□ -1.52
KDELR3O43731 OR2AF1P-201ENST00000454899 889 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 SIAH1P1-201ENST00000479411 923 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.57□□□□□ -1.52
KDELR3O43731 HMGB1P44-201ENST00000508597 572 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 ATP5LP3-201ENST00000514223 304 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 SCARNA16.4-201ENST00000516956 187 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 IGKV2-18-201ENST00000522607 343 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 OR4A17P-201ENST00000526032 904 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.57□□□□□ -1.52
KDELR3O43731 BLZF2P-201ENST00000553776 1130 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KDELR3O43731 AC060766.1-201ENST00000590824 627 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 AC125494.2-201ENST00000602431 657 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 AC005840.5-201ENST00000619166 599 ntBASIC5.57□□□□□ -1.52
KDELR3O43731 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KDELR3O43731 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
KDELR3O43731 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
KDELR3O43731 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KDELR3O43731 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.56□□□□□ -1.52
KDELR3O43731 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KDELR3O43731 AC079097.1-201ENST00000512187 1399 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 RN7SKP162-201ENST00000363605 345 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 U3.28-201ENST00000391249 210 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 AC009804.1-201ENST00000400949 179 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 AL391361.1-201ENST00000405580 489 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.56□□□□□ -1.52
KDELR3O43731 PRUNEP1-201ENST00000425846 705 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.56□□□□□ -1.52
KDELR3O43731 CYCSP12-201ENST00000437729 300 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 AL161722.1-201ENST00000446972 1032 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 AL672138.1-201ENST00000450604 1015 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 AL133445.1-201ENST00000467051 452 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.56□□□□□ -1.52
KDELR3O43731 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.56□□□□□ -1.52
KDELR3O43731 AC091912.1-201ENST00000511351 248 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.56□□□□□ -1.52
KDELR3O43731 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
KDELR3O43731 BX510359.5-201ENST00000515651 304 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.56□□□□□ -1.52
KDELR3O43731 AP000619.2-201ENST00000546014 969 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.56□□□□□ -1.52
KDELR3O43731 MIR3176-201ENST00000582210 90 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 AL139041.1-201ENST00000605480 610 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 AC022467.1-201ENST00000614738 749 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 AP002512.4-202ENST00000641599 4530 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
KDELR3O43731 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 AC092070.2-203ENST00000598377 3644 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
KDELR3O43731 AL359715.3-201ENST00000569267 2123 ntBASIC5.56□□□□□ -1.52
KDELR3O43731 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
KDELR3O43731 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KDELR3O43731 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KDELR3O43731 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KDELR3O43731 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.55□□□□□ -1.52
KDELR3O43731 AC025470.1-201ENST00000510053 2032 ntBASIC5.55□□□□□ -1.52
KDELR3O43731 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
KDELR3O43731 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KDELR3O43731 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
KDELR3O43731 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms