Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 OR7E101P-201ENST00000400428 513 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AL024507.1-201ENST00000412741 274 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AL354890.1-201ENST00000413730 346 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 Z93019.1-201ENST00000416450 973 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 RPL34P3-201ENST00000421454 338 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 BX510359.3-201ENST00000422168 306 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 RPS26P39-201ENST00000469206 341 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC092824.1-201ENST00000483524 576 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 TRAV31-201ENST00000502780 342 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC021087.2-201ENST00000504656 1203 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC008945.1-201ENST00000505144 499 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC008638.1-201ENST00000506035 866 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 RNA5SP400-201ENST00000517155 111 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC004923.2-201ENST00000529649 369 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 RPA2P3-201ENST00000533268 770 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 YWHAZP1-201ENST00000556286 722 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC016180.1-201ENST00000567945 403 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 MIR4301-201ENST00000577203 66 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC005021.1-201ENST00000608730 355 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC008759.3-201ENST00000613300 508 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC096861.1-201ENST00000616652 240 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC012254.5-201ENST00000623573 478 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC090617.9-201ENST00000623751 147 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC013488.1-201ENST00000526618 1838 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 AC009779.8-201ENST00000641684 4384 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 TNPO1P2-201ENST00000426249 2665 ntBASIC5.8□□□□□ -1.48
CCDC187A0A096LP49 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AP000432.2-201ENST00000624164 2048 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC105749.1-201ENST00000631338 2008 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 FAM32BP-201ENST00000344033 333 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 MIR433-201ENST00000384837 93 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 GSTA12P-201ENST00000402398 508 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AL391361.1-201ENST00000405580 489 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 RNU6-584P-201ENST00000410350 95 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 NIFKP3-201ENST00000417799 865 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 RNFT1P2-201ENST00000443064 757 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC016027.4-201ENST00000450866 277 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 RNA5SP362-201ENST00000516048 118 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms