Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC005178.1-201ENST00000508392 440 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC122134.1-201ENST00000565664 1104 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 EIF4A3P1-201ENST00000578499 647 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC061975.5-201ENST00000584928 1441 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 PLEKHA3P1-201ENST00000598554 894 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 BNIP3P11-201ENST00000603878 563 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC116312.1-201ENST00000606841 314 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AP001437.1-201ENST00000608783 456 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC117490.2-201ENST00000610042 594 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AL121809.2-201ENST00000613169 341 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AL161420.1-201ENST00000619393 264 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 AL133243.4-201ENST00000623116 3109 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02035-201ENST00000610128 5476 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 KARSP2-201ENST00000415696 1639 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 EEF1A1P12-201ENST00000443590 1346 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 LRRC37A12P-201ENST00000454917 1801 ntBASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PDZRN3Q9UPQ7 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SKP191-201ENST00000364713 306 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC003045.1-201ENST00000398779 713 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 NCOR1P3-201ENST00000420479 303 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 GSTA6P-201ENST00000424144 582 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 HNRNPA1P29-201ENST00000426409 879 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 CYP4F32P-201ENST00000426492 504 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AL354893.1-201ENST00000433735 348 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 RPL12P11-201ENST00000439970 501 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 MTCYBP42-201ENST00000444653 1130 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC099670.1-201ENST00000455141 783 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC093166.4-201ENST00000457867 318 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 KLF3P2-201ENST00000465138 268 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC004815.1-201ENST00000484185 331 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC093663.2-201ENST00000484625 313 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 MTCYBP43-201ENST00000513621 740 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 RN7SKP11-201ENST00000517018 287 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 OR56A7P-201ENST00000524865 941 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 OR4A21P-201ENST00000532759 944 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC125611.2-201ENST00000551907 647 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 MIR4428-201ENST00000584884 73 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC006006.1-201ENST00000603082 144 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC010338.1-201ENST00000621823 717 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AC112487.2-201ENST00000637950 304 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AL596275.2-203ENST00000641951 371 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 NEK2P2-201ENST00000438441 1338 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 AL121949.2-201ENST00000403446 1548 ntBASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PDZRN3Q9UPQ7 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PDZRN3Q9UPQ7 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms